| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3758457 = | NA (NA) | 127 (0.250) | 4/110 | NT | 15.3% | coding (2915/4134 nt) | rhsA | Rhs family protein, putative polymorphic toxin; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor |
| ? | CP009273 | 3760580 = | 716 (1.360) | intergenic (+41/‑1) | yibA/rhsJ | HEAT‑domain lethality reduction protein; putative immunity protein for putative polymorphic toxin RhsA/Rhs‑family protein | |||||
Only 100 of 1104 total aligned reads displayed.
GCTATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCT > CP009273/3760513‑3760647 | aaagatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg < 1:22890539‑M2/1‑1 (MQ=255) tATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGt < 1:24663506/68‑1 (MQ=255) tATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGt < 1:11368021/68‑1 (MQ=255) tATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGt < 1:33482063/68‑1 (MQ=255) tATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGt < 1:20921443/68‑1 (MQ=255) tATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGt < 1:42204083/68‑1 (MQ=255) tATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGt < 1:18510649/68‑1 (MQ=255) aagatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:36284135‑M2/66‑66 (MQ=255) agatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:10712236‑M2/65‑65 (MQ=255) agatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:5406186‑M2/65‑65 (MQ=255) agatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcacaagccggtgctg > 1:39719366‑M2/65‑65 (MQ=255) gatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:23894789‑M2/64‑64 (MQ=255) gatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:15975276‑M2/64‑64 (MQ=255) tAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGAt > 1:29206905/1‑68 (MQ=255) tAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGAt < 1:17064310/68‑1 (MQ=255) tAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGAt < 1:5912776/68‑1 (MQ=255) aGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGAt > 1:21726280/1‑66 (MQ=255) gCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGc > 1:25164159/1‑67 (MQ=255) tGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCg > 1:16219222/1‑68 (MQ=255) aGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGAcc > 1:27306372/1‑68 (MQ=255) cGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCg > 1:32815777/1‑67 (MQ=255) cGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCg > 1:30718296/1‑67 (MQ=255) gTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGc < 1:40174838/68‑1 (MQ=255) tCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTg > 1:31445554/1‑68 (MQ=255) cATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTgg < 1:1006593/68‑1 (MQ=255) tAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGGACGGTGCAGATGCTCGACCGGCTGGag > 1:21235983/1‑67 (MQ=255) aGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGaaa > 1:27865114/1‑68 (MQ=255) gCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAg > 1:43669941/1‑68 (MQ=255) cGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGt > 1:19524094/1‑68 (MQ=255) cGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGt > 1:38940809/1‑68 (MQ=255) cGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGt > 1:13351696/1‑68 (MQ=255) cGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGt > 1:12615724/1‑68 (MQ=255) cGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGt > 1:8713325/1‑68 (MQ=255) cGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGt > 1:33963068/1‑68 (MQ=255) cGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGt > 1:8307013/1‑68 (MQ=255) tGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGa > 1:35328804/1‑68 (MQ=255) gAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGt < 1:17589511/40‑1 (MQ=255) aGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGaaa > 1:6303248/1‑68 (MQ=255) gTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGaaa > 1:23496597/1‑67 (MQ=255) gCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAt > 1:38626714/1‑65 (MQ=255) ccTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTg > 1:16646216/1‑68 (MQ=255) cTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAGGTGAAATCCTg > 1:14993853/1‑67 (MQ=255) cTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTgg < 1:13814028/68‑1 (MQ=255) cacaGTGGGGGATTCCCGCCGGCACGGTGCAGCTGCTCGACAGGCTGGAAAGTGAAATCCTGGCTGa > 1:36474249/1‑67 (MQ=255) cacaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTg > 1:6586389/1‑66 (MQ=255) cacaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGa > 1:691380/1‑67 (MQ=255) cacaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGa > 1:29466018/1‑67 (MQ=255) cacaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGa > 1:10302914/1‑67 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCTGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:26025259/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGccc > 1:28052291/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:3736330/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:18912192/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:26662812/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:21967886/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc < 1:40667742/68‑1 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:32051270/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:25646859/1‑68 (MQ=255) caGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCg > 1:40409531/1‑68 (MQ=255) aGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCgg > 1:28448926/1‑68 (MQ=255) gTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg > 1:33219994/1‑68 (MQ=255) gTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg > 1:41828522/1‑68 (MQ=255) gTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg > 1:43405109/1‑68 (MQ=255) gTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg > 1:7566363/1‑68 (MQ=255) gTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg > 1:12921245/1‑68 (MQ=255) gTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg > 1:17852653/1‑68 (MQ=255) gTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg > 1:30414752/1‑68 (MQ=255) gggggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg < 1:22543243/66‑1 (MQ=255) gggggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg < 1:20025020/66‑1 (MQ=255) gggggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtg > 1:34414734/1‑68 (MQ=255) ggggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtga > 1:31016123/1‑68 (MQ=255) ggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGCCCGGgtgagt > 1:38131654/1‑68 (MQ=255) ggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagt > 1:24431355/1‑68 (MQ=255) ggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgag < 1:20512903/67‑1 (MQ=255) ggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCGGACCGGgtgag < 1:41015558/67‑1 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGCCCGGCTGGATAGTGAAATCCTGGCTGCCCGGgtgagtgc > 1:32520942/1‑67 (MQ=17) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:28750802/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:4796725/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:26211188/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:31600992/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:34921144/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:1463509/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:37768775/1‑68 (MQ=255) cccGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGa > 1:23200167/1‑68 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGCCCGGGTGAGTGAGGaaa > 1:41594487‑M2/9‑67 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:14210064‑M2/9‑67 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:42886189‑M2/9‑67 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:35868943‑M2/9‑67 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:18052689‑M2/9‑67 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:9116725‑M2/9‑67 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:11882616‑M2/9‑67 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTCGCTGACCGGGTGAGTGAGGaaa > 1:29837307‑M2/9‑67 (MQ=255) ggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgcc > 1:39184738‑M2/7‑68 (MQ=255) ggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgcc > 1:36779107‑M2/7‑68 (MQ=255) ggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgcc > 1:7270805‑M2/7‑68 (MQ=255) tgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccg > 1:9620251‑M2/5‑67 (MQ=255) gctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgcc > 1:35118373‑M2/4‑68 (MQ=255) gctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgcc > 1:27638761‑M2/4‑68 (MQ=255) gctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgcc < 1:15435872‑M2/65‑1 (MQ=255) aCGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgcc > 1:7959788/1‑67 (MQ=33) aCGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgcc > 1:1234688/1‑67 (MQ=33) | GCTATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCT > CP009273/3760513‑3760647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |