| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3820789 | NA (NA) | 4 (0.010) | 3/98 | NT | NA | intergenic (+138/+31) | recG/gltS | ATP‑dependent DNA helicase/glutamate transporter |
| ? | CP009273 | = 3820811 | NA (NA) | intergenic (+160/+9) | recG/gltS | ATP‑dependent DNA helicase/glutamate transporter | |||||
Only 100 of 609 total aligned reads displayed.
ATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGACGATA > CP009273/3820744‑3820877 | aTACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGC > 1:4862955‑M2/1‑68 (MQ=255) aCGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCtt < 1:20068213/68‑1 (MQ=255) aCGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCt > 1:35051824/1‑67 (MQ=255) cGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTc > 1:24347948/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:43664283/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:11072500/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:32197613/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:7543666/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:17653740/1‑68 (MQ=255) cAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:12746640/1‑67 (MQ=255) ggCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCg > 1:18386160/1‑68 (MQ=255) ggCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACAGCCGCTTCATCg > 1:3514986/1‑68 (MQ=255) cTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGt > 1:36216405/1‑68 (MQ=255) cTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGt > 1:17930047/1‑68 (MQ=255) cTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGt > 1:39115542/1‑68 (MQ=255) cTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGt > 1:18846077/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACGACCGCTTCATCGGTTAAcc > 1:20694726/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:23404371/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:5233690/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:10671823/1‑68 (MQ=255) agcgaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCg > 1:34853800/1‑67 (MQ=255) agcgaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCg > 1:19419949/1‑67 (MQ=255) cgaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCa > 1:16293662/1‑68 (MQ=255) cgaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCa > 1:22290847/1‑68 (MQ=255) gaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCaa > 1:35419819/1‑68 (MQ=255) agcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCaaaa > 1:39566654/1‑68 (MQ=255) gcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCaaaaa > 1:41157933/1‑68 (MQ=255) cgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCaaaaa > 1:43421439/1‑67 (MQ=255) tCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGc > 1:29523784/1‑68 (MQ=255) aGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCa > 1:1728282/1‑67 (MQ=255) gCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGgcagca > 1:13739791/1‑68 (MQ=255) gCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa > 1:28062698/1‑68 (MQ=255) gCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa > 1:41557091/1‑68 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAAc < 1:14818785/66‑1 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAAc < 1:25517188/66‑1 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa > 1:24821640/1‑67 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:40722395/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:1974030/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:33083348/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:32666281/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:31597860/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:26084485/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:41931083/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:3595561/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:571288/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:37442768/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:8413202/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:8960919/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCAATTCTACCGCCCCTTCAACGGTTAACCGGCAAAAATCGCCAACATc > 1:695925/1‑68 (MQ=255) ttGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCaa < 1:2496015/68‑1 (MQ=255) gTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAAt < 1:38219608/68‑1 (MQ=255) tCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAAt > 1:38437454/1‑67 (MQ=255) tCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAAt > 1:31982544/1‑67 (MQ=255) tttGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACa < 1:12231236/68‑1 (MQ=255) tgttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAAc < 1:10174814/68‑1 (MQ=255) tgttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAAc < 1:10387189/68‑1 (MQ=255) tgttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAAc < 1:28592194/68‑1 (MQ=255) tgttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAAc < 1:30507948/68‑1 (MQ=255) ttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt > 1:41354815/1‑68 (MQ=255) ttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt > 1:21681754/1‑68 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:42517523/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:11656977/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:6435459/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:14229749/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:1714722/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:26916203/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:27279459/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:33340707/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:29111362/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTa > 1:34498621/1‑68 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTa > 1:29735451/1‑68 (MQ=255) gcggcgGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTaa < 1:40240520/68‑1 (MQ=255) ggcggcACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAAtt < 1:30281766/68‑1 (MQ=255) ggcggcACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAAtt > 1:37285508/1‑68 (MQ=255) cggcACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCTAATACAACTTAATTa < 1:42826845/67‑1 (MQ=255) aCTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAgc < 1:12120389/68‑1 (MQ=255) cTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAgcg < 1:11476100/68‑1 (MQ=255) cTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAgcg < 1:14056593/68‑1 (MQ=255) ttCTACCGCCGCTTCATCGGGTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAgcgc < 1:22861465/68‑1 (MQ=255) tCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCa < 1:36839779/68‑1 (MQ=255) tCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCa < 1:5489797/68‑1 (MQ=255) aCCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTg > 1:15495574/1‑68 (MQ=255) aCCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTg > 1:33792280/1‑68 (MQ=255) aCCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTg > 1:815817/1‑68 (MQ=255) ccgccgCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTg > 1:43084060/1‑67 (MQ=255) ccgccgCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGa < 1:42257317/68‑1 (MQ=255) ccgccgCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGa < 1:16812638/68‑1 (MQ=255) ccgccgCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGa < 1:2110292/68‑1 (MQ=255) ccgccgCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGa < 1:26390412/68‑1 (MQ=255) cgccgcTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGAc > 1:13417014/1‑68 (MQ=255) cgccgcTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGAc > 1:37805414/1‑68 (MQ=255) cgccgcTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGAc > 1:10876596/1‑68 (MQ=255) cgccgcTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGAc > 1:15803312/1‑68 (MQ=255) cgccgcTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGAc > 1:21424204/1‑68 (MQ=255) cgccgcTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGAc > 1:23820381/1‑68 (MQ=255) cgccgcTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGAc > 1:31152651/1‑68 (MQ=255) cgccgcTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGAc > 1:38709772/1‑68 (MQ=255) ccgcTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGACGa > 1:25253660/1‑68 (MQ=255) ccgcTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGACGa > 1:9727452/1‑68 (MQ=255) cgcaacaaagacaaatgcctgatacgcttcgcttatcaagcctgcgtattgattcataatttattgaa < 1:7779484‑M2/68‑66 (MQ=255) | ATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGACGATA > CP009273/3820744‑3820877 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |