| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 138464 = | NA (NA) | 11 (0.020) | 7/94 | NT | NA | intergenic (+10/+31) | hpt/can | hypoxanthine phosphoribosyltransferase/carbonic anhydrase |
| ? | CP009273 | 138487 = | NA (NA) | intergenic (+33/+8) | hpt/can | hypoxanthine phosphoribosyltransferase/carbonic anhydrase | |||||
Only 100 of 610 total aligned reads displayed.
CGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCT > CP009273/138420‑138553 | cGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcat > 1:10253922/1‑68 (MQ=255)cGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcat > 1:16415632/1‑68 (MQ=255) atttCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggc < 1:15323849/65‑1 (MQ=255) atatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggc < 1:30598050/68‑1 (MQ=255) atatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggc < 1:9735404/68‑1 (MQ=255) atatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggc < 1:793596/68‑1 (MQ=255) atatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggc > 1:6350947/1‑68 (MQ=255) atatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggc < 1:32941641/68‑1 (MQ=255) atatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggc < 1:27228914/68‑1 (MQ=255) atatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggc > 1:12311593/1‑68 (MQ=255) atatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggc < 1:11930264/68‑1 (MQ=255) tatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggca < 1:26009059/68‑1 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:35805249/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat < 1:29026483/68‑1 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:21031114/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:11433844/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:16779278/1‑68 (MQ=255) tCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCAtt > 1:8334037/1‑68 (MQ=255) tCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCAtt > 1:30862990/1‑68 (MQ=255) cGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCAttt < 1:27353827/68‑1 (MQ=255) ggCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCAtttt > 1:18627037/1‑68 (MQ=255) aaaGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTa < 1:40992272/67‑1 (MQ=255) aaaGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTa < 1:658908/67‑1 (MQ=255) aaaGTGATTCTGATGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTa < 1:23885752/67‑1 (MQ=255) gTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTtg > 1:5361400/1‑68 (MQ=255) gATTCTGCTGGACGAGTACGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTtgtg < 1:14953734/68‑1 (MQ=255) gATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTtgtg < 1:5807502/68‑1 (MQ=255) acacgccaaccacaaataaaaatgccaTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTgg < 1:22492018‑M1/41‑1 (MQ=255) ttCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGt < 1:22773718/68‑1 (MQ=255) tCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGtt > 1:13148514/1‑68 (MQ=255) tCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGtt > 1:41923830/1‑68 (MQ=255) tCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGtt > 1:32614280/1‑68 (MQ=255) tgctgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTg > 1:17648721/1‑67 (MQ=255) tgctgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTg > 1:38815811/1‑67 (MQ=255) tgctgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTg > 1:1725916/1‑67 (MQ=255) gctgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGc < 1:24803426/68‑1 (MQ=255) gctgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGc < 1:39835087/68‑1 (MQ=255) gctgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGc < 1:28373165/68‑1 (MQ=255) caaccacaaataaaaatgccatgccggatgcaacacatccggcaTGGCATTTTTATTTGTGGTTGGc < 1:3448865‑M2/23‑1 (MQ=255) tgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCgt > 1:34970506/1‑68 (MQ=255) tgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCgt > 1:40667249/1‑68 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCgtgt < 1:27851644/67‑1 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:31394390/1‑68 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:35982781/1‑68 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:37634280/1‑68 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:14792628/1‑68 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:19540007/1‑68 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:21573399/1‑68 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:5296888/1‑68 (MQ=255) aCGAGTAAGTGGGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCgtgt < 1:23425595/67‑1 (MQ=255) cGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:7691071/1‑67 (MQ=255) cGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:24449652/1‑67 (MQ=255) gAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTc > 1:13583359/1‑68 (MQ=255) tAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCa > 1:33564256/1‑66 (MQ=255) taaaaatgccaTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCt < 1:41403358‑M1/57‑1 (MQ=255) aaGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAg < 1:15614350/66‑1 (MQ=255) aaGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGc < 1:42191014/67‑1 (MQ=255) aaGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGc < 1:38564729/67‑1 (MQ=255) tgtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGa > 1:1383342/1‑68 (MQ=255) tgtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGa > 1:12644053/1‑68 (MQ=255) tgtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGa > 1:31803556/1‑68 (MQ=255) tgtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGa > 1:3679666/1‑68 (MQ=255) gtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAg > 1:20867831/1‑68 (MQ=255) gtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAg > 1:4734647/1‑68 (MQ=255) gtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAg < 1:28638908/68‑1 (MQ=255) gtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAg > 1:14048903/1‑68 (MQ=255) gAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAgg < 1:37068024/67‑1 (MQ=255) aGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTg > 1:32285281/1‑68 (MQ=255) aGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTg > 1:39453754/1‑68 (MQ=255) aGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTg > 1:40197209/1‑68 (MQ=255) aGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTg > 1:33938208/1‑68 (MQ=255) aGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTg > 1:26513109/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:18796515/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:26926177/1‑68 (MQ=255) CGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAAt < 1:39140376‑M1/67‑1 (MQ=255) TGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCg > 1:1591055‑M1/1‑67 (MQ=255) TGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCg > 1:43609659‑M1/1‑67 (MQ=255) TGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGt < 1:21939747‑M1/68‑1 (MQ=255) GTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGt < 1:14358016‑M1/67‑1 (MQ=255) GTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTg < 1:9514236‑M1/68‑1 (MQ=255) gtTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGAc < 1:19262765/68‑1 (MQ=255) gtTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGAc < 1:25203400/68‑1 (MQ=255) tGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACgg > 1:11117722/1‑68 (MQ=255) tGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACg < 1:37202778/67‑1 (MQ=255) tGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACg < 1:42706951/67‑1 (MQ=255) tGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACg < 1:34313521/67‑1 (MQ=255) atccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTa > 1:33106543‑M2/9‑67 (MQ=255) atccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTa > 1:35382528‑M2/9‑67 (MQ=255) atccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTa > 1:36357319‑M2/9‑67 (MQ=255) atccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTa > 1:18159917‑M2/9‑67 (MQ=255) tccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAAc < 1:10567234‑M2/61‑1 (MQ=255) ccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACg > 1:16034826‑M2/7‑68 (MQ=255) ccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACg < 1:7183623‑M2/62‑1 (MQ=255) ccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACg > 1:2026848‑M2/7‑68 (MQ=255) ccggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACg > 1:38239367‑M2/7‑68 (MQ=255) ggcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGtt < 1:29644717‑M2/64‑1 (MQ=255) gcaTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGtt > 1:43119709‑M2/4‑67 (MQ=255) caTGGCATTTTTATTTGTGGTTGGCGTCTTTCCGCTTGAGCTTGGAAATCCCGTGACGGTAACgta > 1:8945304‑M2/3‑65 (MQ=255) aaTGGCATTTTTATTTGTGGTTGGCGTTTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGc < 1:7394279‑M2/66‑1 (MQ=255) aTGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCt < 1:25534329‑M2/67‑1 (MQ=255) | CGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCT > CP009273/138420‑138553 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |