| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2502173 | 315 (0.600) | 19 (0.040) | 10/92 | NT | 7.3% | coding (733/966 nt) | glk | glucokinase |
| ? | CP009273 | = 2502211 | 225 (0.520) | coding (695/966 nt) | glk | glucokinase | |||||
Only 100 of 368 total aligned reads displayed.
GTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTG > CP009273/2502145‑2502277 | gTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAACCAGCGACAATGCGCg < 1:43600165‑M2/68‑2 (MQ=255)gTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCg < 1:43098316‑M2/68‑2 (MQ=255) cccGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggc > 1:21557240‑M2/1‑65 (MQ=255) cccGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggc > 1:26833615‑M2/1‑65 (MQ=255) cGAGATTGAGCGCCAGATTGCCGCCAACACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcgg > 1:28675347‑M2/1‑63 (MQ=255) cGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcgg > 1:38248616‑M2/1‑63 (MQ=255) cGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcgg > 1:15797978‑M2/1‑63 (MQ=255) gaTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:38673713‑M2/68‑9 (MQ=255) gaTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:25407407‑M2/68‑9 (MQ=255) gaTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:23860117‑M2/68‑9 (MQ=255) aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:13421255‑M2/67‑9 (MQ=255) aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:7764172‑M2/67‑9 (MQ=255) aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:27493110‑M2/67‑9 (MQ=255) aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:15199163‑M2/67‑9 (MQ=255) aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:16186993‑M2/67‑9 (MQ=255) aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:3044243‑M2/67‑9 (MQ=255) aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:16852470‑M2/67‑9 (MQ=255) aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:31226334‑M2/67‑9 (MQ=255) aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGAAGCAAAACAGCGACCATGCGCggcgggac < 1:29284049‑M2/67‑9 (MQ=255) tGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCg < 1:30999268/68‑1 (MQ=255) aGCGCCAGATTGCCGCCAACACGGCCCATTATGACGCAATACTGCGACAATGCGCGGCGGCAATCGGt > 1:12039870/1‑68 (MQ=255) aGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCATTCGGt > 1:33028645/1‑68 (MQ=255) aGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt > 1:4918501/1‑68 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGTCAATGCGCGGCGGCAATCGGt > 1:14337648/1‑67 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt < 1:18677097/67‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt < 1:35910564/67‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt > 1:37169220/1‑67 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt < 1:35089087/67‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt < 1:35029926/67‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt < 1:24265011/67‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt < 1:41475212/67‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt < 1:17937557/67‑1 (MQ=255) gcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCa > 1:144461/1‑68 (MQ=255) gcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCa > 1:28371665/1‑68 (MQ=255) ccAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCAGCGGCAATCGGTGCa > 1:40798863/1‑67 (MQ=255) accgATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCa > 1:41100317/4‑67 (MQ=255) accgATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCa > 1:32094779/4‑67 (MQ=255) cAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGc < 1:33984683/68‑1 (MQ=255) aGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCa > 1:29590739/1‑65 (MQ=255) aTTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCa > 1:37306910/1‑63 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACCGCGACAATGCGCGGCGGCAATCCGTGCAGCTGTc > 1:6742415/1‑68 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt < 1:3692765/65‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt < 1:16630059/65‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt < 1:22969405/65‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt < 1:19462468/65‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt < 1:39982681/65‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGt > 1:39619952/1‑67 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTc > 1:40678364/1‑68 (MQ=255) tGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTca < 1:14142323/68‑1 (MQ=255) ccgccAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTcag > 1:14644847/1‑67 (MQ=255) gccAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTcagcca > 1:30154949/1‑68 (MQ=255) gccAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTcagcca > 1:21160330/1‑68 (MQ=255) cAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaatctggcgctcaatctcggga > 1:36393380‑M2/1‑39 (MQ=255) cAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTcagccagc > 1:39294923/1‑68 (MQ=255) aaCGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAgcgc > 1:26598863/1‑67 (MQ=255) aaCGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAgcgc > 1:12213737/1‑67 (MQ=255) ccATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCg < 1:26364838/68‑1 (MQ=255) ccATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCg < 1:8151830/68‑1 (MQ=255) ccATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCg < 1:9052631/68‑1 (MQ=255) atatTGTCGAAAAACTGCGACAATGCGCGTCTGCAATCGGTTCCGCTGTCAGCCAGCGCGCGTTCGGt < 1:34492672/68‑1 (MQ=25) aTAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGt < 1:3885353/68‑1 (MQ=255) aTAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGt < 1:11166901/68‑1 (MQ=255) aTAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGt < 1:10137508/68‑1 (MQ=255) aaTGACCCAAAACACCGACAAAGCGCggcggcaatctggcgctcaatctcgggacatttggcggcgtg > 1:5535855‑M2/1‑26 (MQ=255) aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat > 1:40729477/1‑68 (MQ=255) aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat < 1:5284269/68‑1 (MQ=255) aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat > 1:7305954/1‑68 (MQ=255) aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat > 1:9298313/1‑68 (MQ=255) aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat > 1:12821086/1‑68 (MQ=255) aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat > 1:31785664/1‑68 (MQ=255) aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat > 1:19250114/1‑68 (MQ=255) aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCAAGCGCGCCTTCGGTAat > 1:4174498/1‑68 (MQ=255) gACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAatat < 1:1400263/68‑1 (MQ=255) gACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAata > 1:8492704/1‑67 (MQ=255) aCGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAata > 1:29890413/1‑66 (MQ=255) cGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATc < 1:30532377/67‑1 (MQ=255) cGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATc < 1:6053399/67‑1 (MQ=255) cGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATc < 1:23674754/67‑1 (MQ=255) cGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCt < 1:30625310/68‑1 (MQ=255) cGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCt < 1:42159802/68‑1 (MQ=255) gCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCtt > 1:10330226/1‑68 (MQ=255) aaaaCAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCtttt > 1:35258255/1‑68 (MQ=255) aaCAGCGACAATGCGCggcggcaatctggcgctcaatctcgggacatttggcggcgtgtttattgcgg > 1:24862169‑M2/1‑16 (MQ=255) aaCAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTgg < 1:13281099/68‑1 (MQ=255) aCAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTg > 1:24066703/1‑66 (MQ=255) aCAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTg > 1:135904/1‑66 (MQ=255) aCAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTg > 1:28930359/1‑66 (MQ=255) aCAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGc < 1:28000165/68‑1 (MQ=255) aCAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGc < 1:22104082/68‑1 (MQ=255) gACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTgag > 1:26107480/1‑68 (MQ=255) gACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTgag > 1:4502345/1‑68 (MQ=255) cAATGCGCggcggcaatctggcgctcaatctcgggacatttggcggcgtgtttattgcgggcggtat > 1:3606638‑M2/1‑8 (MQ=255) cAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGAt < 1:39822621/68‑1 (MQ=255) aaTGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGAtt > 1:32381206/1‑68 (MQ=255) tGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGAttt > 1:42350351/1‑67 (MQ=255) gcgcGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGAttt > 1:1831316/1‑66 (MQ=255) gcggcgGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTg > 1:20306484/1‑68 (MQ=255) gcggcgGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTg > 1:22664889/1‑68 (MQ=255) gcggcgGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTg > 1:33362613/1‑68 (MQ=255) gcggcgGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTg > 1:23367234/1‑68 (MQ=255) | GTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTG > CP009273/2502145‑2502277 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |