| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2930783 = | NA (NA) | 9 (0.020) | 5/90 | NT | NA | intergenic (+65/‑14) | fucI/fucK | L‑fucose isomerase/L‑fuculokinase |
| ? | CP009273 | 2930811 = | NA (NA) | coding (15/1449 nt) | fucK | L‑fuculokinase | |||||
Only 100 of 632 total aligned reads displayed.
GGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCAGGG > CP009273/2930744‑2930878 | ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:27485991/68‑1 (MQ=255)ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:41882170/68‑1 (MQ=255)ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:27135809/68‑1 (MQ=255)ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:39700791/68‑1 (MQ=255)ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:12827426/68‑1 (MQ=255)ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:13205675/68‑1 (MQ=255)ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:3059785/68‑1 (MQ=255)accaggctaacttcttgtttcataatcgctcctgcaataTAGCCGGATAAGCAATGTTATGCGGGtat < 1:19936528‑M1/29‑1 (MQ=255) gTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata > 1:8421009/1‑68 (MQ=255) tCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata < 1:34300328/67‑1 (MQ=255) tCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata < 1:8116719/67‑1 (MQ=255) ctcTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGAAAAGCAATGTTATCCGGCTATAtt < 1:24460795/66‑1 (MQ=255) cGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAtt > 1:22705679/1‑68 (MQ=255) cGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAtt < 1:18262328/68‑1 (MQ=255) cGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAtt < 1:18003053/68‑1 (MQ=255) cGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAtt > 1:42537981/1‑68 (MQ=255) cGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAtt < 1:17163552/68‑1 (MQ=255) cGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAtt < 1:2846648/68‑1 (MQ=255) cGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAtt < 1:40538145/68‑1 (MQ=255) cGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTAGTTAGCCGGATAAGCAATGTTATCCGGCTATAtt < 1:19052132/68‑1 (MQ=255) cttcttgtttcataatcgctcctgcaatatagccggataacattgcttatccggctaTATTGCAGGAg < 1:4482546‑M2/11‑1 (MQ=255) cTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAg < 1:5953150/67‑1 (MQ=255) cTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGc > 1:24772585/1‑68 (MQ=255) tACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCg > 1:26516050/1‑68 (MQ=255) tACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCg < 1:10836360/68‑1 (MQ=255) tACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCg < 1:38338933/68‑1 (MQ=255) tACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCg > 1:21476858/1‑68 (MQ=255) tACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCg > 1:2789206/1‑68 (MQ=255) ccGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt < 1:11413534/68‑1 (MQ=255) ccGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt < 1:32303579/68‑1 (MQ=255) gCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATg > 1:43535982/1‑68 (MQ=255) tGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGaaa < 1:1187991/68‑1 (MQ=255) aCAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACa < 1:26675257/67‑1 (MQ=255) agcaagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaagaa < 1:41402057/68‑1 (MQ=255) agcaagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaagaa < 1:37031058/68‑1 (MQ=255) agcaagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaagaa < 1:7582256/68‑1 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:23957604/1‑68 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:16426397/1‑68 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:38011685/1‑68 (MQ=255) agTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTAt > 1:5488818/1‑67 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTAt > 1:35110088/1‑66 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATc < 1:31440200/67‑1 (MQ=255) tGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTAt > 1:41555568/1‑65 (MQ=255) aatatagccggaaaacattgcatatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATcc < 1:39345058‑M2/35‑1 (MQ=255) ggTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTg > 1:13342008/1‑68 (MQ=255) ttAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:1112801/1‑68 (MQ=255) ttAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:12462812/1‑68 (MQ=255) ttAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:42992497/1‑68 (MQ=255) aTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt < 1:2075202‑M1/67‑1 (MQ=255) TAGCCTGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:6323264‑M1/1‑67 (MQ=255) TAGCCTGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:21742709‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:37258766‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:35783744‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:38996292‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt < 1:3336178‑M1/67‑1 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt < 1:40126368‑M1/67‑1 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt < 1:30212635‑M1/67‑1 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:15574952‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt < 1:26182427‑M1/67‑1 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt < 1:4224289‑M1/67‑1 (MQ=255) GCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTAc < 1:1230143‑M1/67‑1 (MQ=255) CGGATAAGCAATGTTATCAGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTAATCg < 1:86894‑M1/68‑1 (MQ=255) ATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGAc > 1:1484779‑M1/1‑67 (MQ=255) ATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGAc > 1:7454245‑M1/1‑67 (MQ=255) ATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGAc > 1:18642793‑M1/1‑67 (MQ=255) cAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGgc > 1:1050258/1‑68 (MQ=255) cAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGgc > 1:36482723/1‑68 (MQ=255) gTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGcgcg > 1:6869908/1‑67 (MQ=255) gTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGcgcg > 1:25469646/1‑67 (MQ=255) gTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGcgcg > 1:29705117/1‑67 (MQ=255) ttttccggctaTATTGCAGGTGCGATTATGTAACAATTAGTTATCCTGGTACTCGACTGTGGCGCGAc < 1:5089133‑M2/57‑1 (MQ=255) tatccggcttTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAc < 1:17653956‑M2/57‑1 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAcc > 1:25160635‑M2/11‑68 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAcc > 1:10037673‑M2/11‑68 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAcc < 1:15924498‑M2/58‑1 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAcc > 1:722626‑M2/11‑68 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAcc > 1:66716‑M2/11‑68 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAcc < 1:31054786‑M2/58‑1 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAc < 1:13793329‑M2/57‑1 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAc < 1:42019412‑M2/57‑1 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAc < 1:21036211‑M2/57‑1 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAc < 1:1410326‑M2/57‑1 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAc < 1:37825007‑M2/57‑1 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGAc < 1:34613904‑M2/57‑1 (MQ=255) tatccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTAATCCTGGTACTCGACTGTGGCGCGAcc > 1:20496530‑M2/11‑68 (MQ=255) ccggctaTTTTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAt > 1:23409229‑M2/8‑68 (MQ=255) ccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAt > 1:28972113‑M2/8‑68 (MQ=255) ccggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAAt > 1:37487142‑M2/8‑68 (MQ=255) cggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATg < 1:32810458‑M2/62‑1 (MQ=255) cggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATg < 1:2242169‑M2/62‑1 (MQ=255) cggataTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATg < 1:3552962‑M2/62‑1 (MQ=255) ggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCTACCAATg > 1:21972225‑M2/6‑67 (MQ=255) ggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATg > 1:33483463‑M2/6‑67 (MQ=255) ggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATg > 1:19548401‑M2/6‑67 (MQ=255) ggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGt < 1:38708820‑M2/63‑1 (MQ=255) ggctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGt < 1:26881229‑M2/63‑1 (MQ=255) ctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCa > 1:3393302‑M2/4‑68 (MQ=255) ctaTATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCa > 1:29211615‑M2/4‑68 (MQ=255) aTATTGCAGGAGCGATTATGAACCAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCAgg > 1:20274515‑M2/2‑68 (MQ=255) tatTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACt < 1:40943156/42‑1 (MQ=255) | GGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGTACTCGACTGTGGCGCGACCAATGTCAGGG > CP009273/2930744‑2930878 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |