| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2229998 | 556 (0.790) | 35 (0.060) | 14/92 | NT | 5.5% | intergenic (+19/+224) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit |
| ? | CP009273 | = 2230012 | 757 (1.320) | intergenic (+33/+210) | preA/mglC | dihydropyrimidine dehydrogenase, NADH‑dependent, subunit C/methyl‑galactoside transporter subunit | |||||
Only 100 of 233 total aligned reads displayed.
TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2229922‑2229998‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcatccggcGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < CP009273/2230012‑2229947 TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:33589929/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:41798876/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:43370310/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:43838255/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:18949353/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:45307400/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:46709452/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:4817082/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:5013733/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:1651798/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:33508387/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:29098253/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:54874828/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:28981239/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:55570076/1‑68TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGAC > 1:57648594/1‑68 GAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACG < 1:11194628/68‑1 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAACACCAGAGACGCA > 1:26336273/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:37722614/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:35853066/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:2810306/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:34501032/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:10571412/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:38107018/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:39148889/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:4634160/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:52304461/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:530544/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:53309310/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:55382621/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:56741830/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:9225530/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:10055963/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:12196443/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:13172946/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:147193/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:24972829/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA > 1:16152233/1‑68 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGC < 1:17626574/67‑1 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGC < 1:32170708/67‑1 GCTCGGGGAAGTGAAGTTTAAGAAAGGCGAG‑AAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA < 1:25407258/67‑1 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCAT > 1:34047656/1‑67 TCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCA < 1:53744584/66‑1 GGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCG < 1:52359243/68‑1 GGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCG < 1:37273379/68‑1 GGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCG > 1:444151/1‑67 GGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCG > 1:15915940/1‑67 GGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCG > 1:42665302/1‑67 GGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC > 1:44808262/1‑68 GGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC > 1:23766889/1‑68 GGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC > 1:23916399/1‑68 GGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGG < 1:26889536/67‑1 GGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGG < 1:40351645/67‑1 GGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGG < 1:57401386/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:2191042/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:47422173/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:27746109/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:36906758/67‑1 GAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC < 1:35262598/67‑1 AGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGA < 1:12550234/67‑1 GAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGG < 1:593346/68‑1 GAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACA < 1:15531973/66‑1 TTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAAC < 1:49473758/66‑1 AAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGtgg < 1:10924650/67‑4 AAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGg < 1:3380728/67‑2 ACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCgg > 1:1857433/1‑66 CACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGCCCGGCACCAAATGCCGGCTGCGGCGCTGG > 1:26606206/1‑68 CACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGG > 1:51184786/1‑68 ACGTTGTAAAACCAGAGACGCATCCGGCGCCAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAAC > 1:45051984/1‑68 ACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCCAATGCCGGATGCGTCTCTGGTTTTACAAC > 1:48705363/1‑68 ACGTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAAC > 1:16887300/1‑68 GTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGT < 1:54606646/68‑1 GTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGT > 1:2415912/1‑68 GTTGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGT > 1:21631418/1‑68 TGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTT > 1:33383062/1‑67 TGTAAAACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTT > 1:45374212/1‑67 ACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGT > 1:22516974/1‑68 ACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGT > 1:47857247/1‑68 ACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGT > 1:53245172/1‑68 ACCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGT > 1:46005260/1‑68 CCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTG > 1:20461418/1‑68 CCAGAGACGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTG > 1:6296529/1‑68 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:18332825/1‑66 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT < 1:30549439/66‑1 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT < 1:30340745/66‑1 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT < 1:39746410/66‑1 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT < 1:32517756/66‑1 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT > 1:20222877/1‑66 CGCATCCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTT < 1:19376479/66‑1 CCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTGTCG > 1:45620747/1‑66 CCGGCGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCC < 1:31828481/68‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:28697421/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:54044578/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:29829490/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:30684976/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:17427806/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:20806032/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < 1:27394546/67‑1 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTT > 1:37311018/1‑66 CGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACAGGGTGTTCTTTCTCGCCTT > 1:49767361/1‑66 TGAGCTCGGGGAAGTGAAGTTTAAGAAAGGCGAGAAAGAACACCCGGTAACGTTGTAAAACCAGAGACGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2229922‑2229998‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcatccggcGACAGGAACCAAATGCCGGATGCGTCTCTGGTTTTACAACGTTACCGGGTGTTCTTTCTCGCCTTT < CP009273/2230012‑2229947 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |