| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3847022 = | NA (NA) | 11 (0.020) | 6/88 | NT | NA | intergenic (+20/‑260) | tisB/emrD | toxic membrane persister formation peptide, LexA‑regulated/multidrug efflux system protein |
| ? | CP009273 | 3847050 = | NA (NA) | intergenic (+48/‑232) | tisB/emrD | toxic membrane persister formation peptide, LexA‑regulated/multidrug efflux system protein | |||||
Only 100 of 293 total aligned reads displayed.
GGATAAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCCCCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3847100‑3847022‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctcccctttTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCC > CP009273/3847050‑3847116 GGATAAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCC < 1:960043/68‑1GGATAAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCC < 1:56141379/68‑1 ATAAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCC < 1:50455820/67‑1 TAAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCC > 1:23336419/1‑66 TAAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGGTTCCCGC < 1:36063349/68‑1 AAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCg < 1:25272580/68‑2 AAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCT < 1:48994863/68‑1 AAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCT < 1:53088171/68‑1 AAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCT < 1:5479381/68‑1 AAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCT < 1:8462144/68‑1 AAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGC > 1:30391219/1‑67 AAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGC > 1:425216/1‑67 AAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGC > 1:49280817/1‑67 AAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGC > 1:38537456/1‑67 AAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGC > 1:29972231/1‑67 AAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGC > 1:26434448/1‑67 GATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTC > 1:40339126/1‑67 ATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:44568601/1‑67 cGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCCCC < 1:56400594/67‑1 TGCGTCAGCATCGCATCCGACACCAACCCGCCCGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCCCC > 1:30188809/1‑68 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCCCC < 1:35024563/68‑1 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCCCC < 1:33148168/68‑1 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCCCC < 1:10024669/68‑1 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCCCC < 1:55625196/68‑1 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCCCC < 1:27582150/68‑1 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCCCC < 1:22712335/68‑1 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:42052389/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:12589233/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:42238908/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:121258/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC < 1:11429083/66‑1 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC < 1:39682759/66‑1 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:42874777/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:48506135/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:9373303/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:51737549/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:37413092/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:47767081/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:13745447/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:35624551/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:46945804/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:8800490/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:2374217/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:18971832/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC < 1:25525310/66‑1 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC < 1:19135321/66‑1 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:17920808/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:22032909/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:57859135/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:31310898/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:5507767/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:16293419/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:14639641/1‑66 TGCGTCAGCATCGCATCCGACACCAACCCACACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:44148578/1‑66 TGCGTCAGCAACGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:34714166/1‑66 TGCGTCAGAATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCC > 1:34896827/1‑66 GCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCCCCT < 1:37151790/68‑1 CGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCCCCTT > 1:50153341/1‑68 CGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCCCCTT > 1:47404641/1‑68 CCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGATGCATCTTATCCGCCCT < 1:7383505/68‑1 CCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCT < 1:25643191/68‑1 CCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCT < 1:43995265/68‑1 CCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCT < 1:17798070/68‑1 CCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCT < 1:10828803/68‑1 CCGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCT > 1:21393662/1‑68 CCGCTCCCCTTTTATATTTAGCGTGCGGGTTCGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCT < 1:52727327/68‑1 CGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTA < 1:5712364/68‑1 CGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTA < 1:39355223/68‑1 CGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTA < 1:38085920/68‑1 CGCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCT > 1:6497265/1‑67 GCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTAC < 1:2912345/68‑1 GCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTAC < 1:5127763/68‑1 GCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTAC < 1:16830264/68‑1 GCTCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTAC < 1:46103375/68‑1 TCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCA < 1:45244013/68‑1 TCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCA < 1:7912338/68‑1 TCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCA < 1:3410340/68‑1 TCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCA < 1:33496767/68‑1 TCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACC < 1:13342970/67‑1 TCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACC < 1:48716033/67‑1 TCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACC < 1:45475852/67‑1 TCCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACC < 1:56916549/67‑1 CCCCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCAT < 1:20976386/68‑1 CCTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATATTATCCGCCCTACCATC > 1:28501143/1‑67 CTTTTATATTTAGCGTGGGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTC < 1:49358824/68‑1 CTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTC < 1:27029839/68‑1 CTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTC < 1:10761281/68‑1 CTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTC < 1:5426787/68‑1 CTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTC < 1:53560606/68‑1 CTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTC < 1:40694387/68‑1 CTTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTC < 1:42412481/68‑1 TTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCT < 1:32255945/68‑1 TTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCT < 1:35155129/68‑1 TTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCT < 1:18213714/68‑1 TTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCT < 1:41816294/68‑1 TTTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCT < 1:46606179/68‑1 TTTTATATTTAGCGTGCGGGTTGGTGGCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCT < 1:52226707/68‑1 TTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTC < 1:50909223/68‑1 TTTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCT > 1:26615880/1‑67 TTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCC < 1:20364581/68‑1 GGATAAGATGCGTCAGCATCGCATCCGACACCAACCCGCACGCTAAATATAAAAGGGGAGCGGTTTCCCGCTCCCCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3847100‑3847022‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgctcccctttTATATTTAGCGTGCGGGTTGGTGTCGGATGCGATGCTGACGCATCTTATCCGCCCTACCATCTCTCC > CP009273/3847050‑3847116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |