| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4615358 | 607 (0.870) | 3 (0.010) | 3/94 | NT | 0.59% | coding (647/969 nt) | serB | 3‑phosphoserine phosphatase |
| ? | CP009273 | = 4615477 | 510 (0.870) | coding (766/969 nt) | serB | 3‑phosphoserine phosphatase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 945 total aligned reads displayed.
AACGCTGGGCTGGAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAATTTACCGGCAA > CP009273/4615293‑4615424 | aaCGCTGGGCTGGAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACa > 1:24684304/1‑68 (MQ=255)aaCGCTGGGCTGGAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACa > 1:565337/1‑68 (MQ=255)aaCGCTGGGCTGGAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACa > 1:57023016/1‑68 (MQ=255)aaCGCTGGGCTGGAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCGTTGCTGAATACCTGCGCGACa > 1:48796807/1‑68 (MQ=255) cGCTGGGCTGGAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAg < 1:51767725/68‑1 (MQ=255) cGCTGGGCTGGAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAg < 1:32861593/68‑1 (MQ=255) cGCTGGGCTGGAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAg < 1:13181394/68‑1 (MQ=255) cGCTGGGCTGGAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAg < 1:28424440/68‑1 (MQ=255) cGCTGGGCTGGAAAGTGGAGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAg < 1:10731262/68‑1 (MQ=255) ctgggctggAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGAcca > 1:16021515/1‑63 (MQ=255) ctgggctggAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACaa > 1:25273837/1‑65 (MQ=255) gggctggAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTgc < 1:37017444/68‑1 (MQ=255) gctggAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTgcg > 1:12143294/1‑67 (MQ=255) tggAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGcc < 1:43094375/67‑1 (MQ=255) ggAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTg < 1:57582577/68‑1 (MQ=255) aaaGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGa > 1:46459572/1‑67 (MQ=255) aaaGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGa > 1:26694753/1‑67 (MQ=255) aaaGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCAACAAGCTGCGCCTGa > 1:16465605/1‑67 (MQ=255) aaGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGAcc < 1:48619267/68‑1 (MQ=255) aGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGAcc > 1:37470284/1‑67 (MQ=255) ggCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGAccgccg > 1:28761158/1‑68 (MQ=255) ggCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGAccgccg > 1:49197408/1‑68 (MQ=255) ggCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGAccgcc < 1:55449409/67‑1 (MQ=255) ggCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGAccgcc < 1:48102384/67‑1 (MQ=255) ggCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGAccgcc < 1:13768143/67‑1 (MQ=255) gATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTgg < 1:23011182/68‑1 (MQ=255) ttGCCTCCGGCGGCTTTCCTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTa > 1:29758756/1‑68 (MQ=255) ttGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTa > 1:29270045/1‑68 (MQ=255) tGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCGGCGCCTGACCGCCGTGGTAg < 1:33191855/68‑1 (MQ=255) cTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGcc < 1:35575303/67‑1 (MQ=255) ggcggcTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGa < 1:26092007/68‑1 (MQ=255) ggcggcTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGa < 1:43737928/68‑1 (MQ=255) ggcggcTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGa < 1:11520591/68‑1 (MQ=255) ggcggcTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGa < 1:42590522/68‑1 (MQ=255) gcggcTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGa > 1:22641658/1‑67 (MQ=255) cggcTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGaa < 1:30686317/67‑1 (MQ=255) cggcTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGa > 1:32596313/1‑66 (MQ=255) cggcTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGa > 1:8816472/1‑66 (MQ=255) ggcTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAAc < 1:1442648/67‑1 (MQ=255) tttACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTgg < 1:21399670/67‑1 (MQ=255) tACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGgaga < 1:28023726/68‑1 (MQ=255) tACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGgaga < 1:41182915/68‑1 (MQ=255) aCTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGAt < 1:40511556/68‑1 (MQ=255) aCTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGAt < 1:24042320/68‑1 (MQ=255) tttctttGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCa > 1:21171390/1‑68 (MQ=255) ctttGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATgg > 1:4169340/1‑68 (MQ=255) ttGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGAc > 1:23260113/1‑68 (MQ=255) ttGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGAc > 1:8373884/1‑68 (MQ=255) tGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACg < 1:6814766/68‑1 (MQ=255) gCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACgg < 1:23751839/68‑1 (MQ=255) tGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTa > 1:54799393/1‑68 (MQ=255) tGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTa < 1:39147329/68‑1 (MQ=255) tGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTa < 1:12401133/68‑1 (MQ=255) tGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTa < 1:33757890/68‑1 (MQ=255) aTACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAAt > 1:15508982/1‑68 (MQ=255) aTACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAAt > 1:25773011/1‑68 (MQ=255) tACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAAtt < 1:46077999/68‑1 (MQ=255) tACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAAtt < 1:9414996/68‑1 (MQ=255) tACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAAtt < 1:56057539/68‑1 (MQ=255) tACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAAtt < 1:47394329/68‑1 (MQ=255) aCCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAAttt > 1:22280237/1‑68 (MQ=255) ccTGCGCGAggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccg > 1:39503331‑M1/1‑9 (MQ=255) ccTGCGCGAggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccg > 1:53465317‑M1/1‑9 (MQ=255) ccTGCGCGAggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccg > 1:42411889‑M1/1‑9 (MQ=255) ccTGCGCGAggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccg > 1:3974317‑M1/1‑9 (MQ=255) ccTGCGCGAggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccg > 1:53960040‑M1/1‑9 (MQ=255) ccTGCGCGAggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccg > 1:30227333‑M1/1‑9 (MQ=255) ccTGCGCGAggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccg > 1:31157233‑M1/1‑9 (MQ=255) ccTGCGCGAggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccg > 1:44949579‑M1/1‑9 (MQ=255) ccTGCGCGAggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccg > 1:19193256‑M1/1‑9 (MQ=255) ccTGCGCGAggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccg > 1:35000937‑M1/1‑9 (MQ=255) ccTGCGCGAggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccg > 1:34648553‑M1/1‑9 (MQ=255) ccTGCGCGAggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccg > 1:31482675‑M1/1‑9 (MQ=255) ccTGCGCGAggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccg > 1:31935367‑M1/1‑9 (MQ=255) ccTGCGCGAggcgagtcagagttttcgctttgtactgcgcgtctacgaggtcgccgatcacattgccg > 1:52528754‑M1/1‑9 (MQ=255) ccTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAAttt > 1:44278044/1‑67 (MQ=255) ccTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAAttt > 1:6100923/1‑67 (MQ=255) ccTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAAttt > 1:50211446/1‑67 (MQ=255) ccTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAAttt > 1:7306116/1‑67 (MQ=255) ccTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAAttt > 1:27640807/1‑67 (MQ=255) cTGCGCGAggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccgg < 1:17706939‑M1/68‑61 (MQ=255) tGCGCGACAAGCTGCGCCTGCCCGCCGTGGTAGCCAATGAACTGGAGAGCATGGACGGTAAATTTAcc > 1:46966849/1‑68 (MQ=255) gcgcGAggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccggta < 1:18332668‑M1/68‑63 (MQ=255) cgcgACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAAATTACCg > 1:5086187/1‑67 (MQ=255) gcgaggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccggtaaa > 1:52875910‑M1/1‑4 (MQ=255) gcgaggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccggtaaa > 1:51361027‑M1/1‑4 (MQ=255) gcgaggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccggtaaa > 1:27182843‑M1/1‑4 (MQ=255) gcgaggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccggtaaa > 1:3440055‑M1/1‑4 (MQ=255) gcgaggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccggtaaa > 1:20317116‑M1/1‑4 (MQ=255) gcgaggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccggtaaa > 1:45738399‑M1/1‑4 (MQ=255) gcgaggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccggtaaa > 1:18728144‑M1/1‑4 (MQ=255) gcgaggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccggtaaa > 1:37757307‑M1/1‑4 (MQ=255) gcgaggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccggtaaa > 1:38737323‑M1/1‑4 (MQ=255) gcgaggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccggtaaa > 1:10482401‑M1/1‑4 (MQ=255) gcgaggcgagtcagagttttcgctttgtactgcgcgtctacgatgtcgccgatcacattgccggtaaa > 1:10007349‑M1/1‑4 (MQ=255) gcgACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAATTTACCGGc < 1:49768017/68‑1 (MQ=255) gcgACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAATTTACCGGc < 1:36539040/68‑1 (MQ=255) gACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAATTTACCGGCaa > 1:35921708/1‑68 (MQ=255) gACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAATTTACCGGCaa > 1:8049344/1‑68 (MQ=255) gACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAATTTACCGGCa < 1:19724317/67‑1 (MQ=255) | AACGCTGGGCTGGAAAGTGGCGATTGCCTCCGGCGGCTTTACTTTCTTTGCTGAATACCTGCGCGACAAGCTGCGCCTGACCGCCGTGGTAGCCAATGAACTGGAGATCATGGACGGTAAATTTACCGGCAA > CP009273/4615293‑4615424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |