| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 138464 = | NA (NA) | 6 (0.010) | 6/94 | NT | NA | intergenic (+10/+31) | hpt/can | hypoxanthine phosphoribosyltransferase/carbonic anhydrase |
| ? | CP009273 | 138487 = | NA (NA) | intergenic (+33/+8) | hpt/can | hypoxanthine phosphoribosyltransferase/carbonic anhydrase | |||||
Only 100 of 1288 total aligned reads displayed.
CGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGA > CP009273/138397‑138530 | agcaacgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccat < 1:31045762‑M1/1‑1 (MQ=255) gcaacgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccat < 1:23643857‑M1/1‑1 (MQ=255) gcaacgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccat < 1:26654466‑M1/1‑1 (MQ=255) gcaacgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccat < 1:401686‑M1/1‑1 (MQ=255) gCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTg < 1:50787465/68‑1 (MQ=255) gCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTACTGGACGAGTAAGTGTGAAGTTg < 1:671853/68‑1 (MQ=255) cacaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTg > 1:37890544/1‑67 (MQ=255) cacaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTg > 1:22687350/1‑67 (MQ=255) cacaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTg > 1:46971035/1‑67 (MQ=255) cacaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTg > 1:39208723/1‑67 (MQ=255) cacaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTg > 1:11019812/1‑67 (MQ=255) cacaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTg > 1:11994334/1‑67 (MQ=255) cacaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTg > 1:7294099/1‑67 (MQ=255) cacaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGGAAGTGTGAAGTTg > 1:20006989/1‑67 (MQ=255) acaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGcc > 1:12645956/1‑68 (MQ=255) acaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGcc > 1:22361861/1‑68 (MQ=255) acaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGcc > 1:45507175/1‑68 (MQ=255) aacgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccatgc > 1:1770925‑M1/65‑67 (MQ=255) aacgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccatgc > 1:6321702‑M1/65‑67 (MQ=255) aacgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccatgc > 1:56951816‑M1/65‑67 (MQ=255) cgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCgg > 1:28334190‑M1/63‑68 (MQ=255) cgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCgg > 1:32561191‑M1/63‑68 (MQ=255) cgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCgg > 1:53595519‑M1/63‑68 (MQ=255) cgttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCgg > 1:30134836‑M1/63‑68 (MQ=255) cgttaccgtcacgggattcccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCgg > 1:28831197‑M1/63‑68 (MQ=255) gttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCGGa < 1:34703557‑M1/7‑1 (MQ=255) gttaccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCGGa < 1:51238932‑M1/7‑1 (MQ=255) gCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGa > 1:16461063/1‑68 (MQ=255) taccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCGGAt > 1:44991887‑M1/60‑67 (MQ=255) taccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCGGAt > 1:18770215‑M1/60‑67 (MQ=255) taccgtcacgggatttccaacctcaagctgaaacacgccaaccacaaataaaaatgccaTGCCGGAt > 1:4120049‑M1/60‑67 (MQ=255) gTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGa < 1:36496226/66‑1 (MQ=255) aCCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTTCAAGAGAAAGTGTGAAGATGCAGGATgtgt > 1:32354646/1‑68 (MQ=255) aCCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATgtgt > 1:53851671/1‑68 (MQ=255) aCCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATgtgt < 1:41620809/68‑1 (MQ=255) aCCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATgtgt < 1:53181112/68‑1 (MQ=255) aCCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATgtgt > 1:40716691/1‑68 (MQ=255) aCCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATgtgt > 1:15786271/1‑68 (MQ=255) cGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGtt > 1:24228778/1‑67 (MQ=255) cGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGtt > 1:34093024/1‑67 (MQ=255) cGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGtt > 1:51921738/1‑67 (MQ=255) cGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGtt > 1:13868891/1‑67 (MQ=255) cGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGtt > 1:1518003/1‑67 (MQ=255) cGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGtt > 1:42288044/1‑67 (MQ=255) cGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGtt > 1:21173042/1‑67 (MQ=255) cGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGtt > 1:46399896/1‑67 (MQ=255) gTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGc < 1:49463220/68‑1 (MQ=255) cATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCAt > 1:10006410/1‑68 (MQ=255) tCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATcc > 1:50434997/1‑68 (MQ=255) gCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggc < 1:45937952/68‑1 (MQ=255) cGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcat > 1:21927379/1‑68 (MQ=255) cGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcat > 1:25588829/1‑68 (MQ=255) cGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcat > 1:42846009/1‑68 (MQ=255) atatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggc > 1:7793716/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:14641500/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:16965223/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:3311208/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:18105457/1‑68 (MQ=255) atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat > 1:55183728/1‑68 (MQ=255) cGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCAttt < 1:35980701/68‑1 (MQ=255) cGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCAttt < 1:48990967/68‑1 (MQ=255) cGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCAttt < 1:27192644/68‑1 (MQ=255) cAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTa > 1:55570993/1‑68 (MQ=255) aaaGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTa < 1:26340128/67‑1 (MQ=255) gTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTtg > 1:31476553/1‑68 (MQ=255) tGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTtgt > 1:54797632/1‑68 (MQ=255) gATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTtgtg < 1:52532945/68‑1 (MQ=255) tCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGtt > 1:37414929/1‑68 (MQ=255) tCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTCGtt > 1:4989822/1‑68 (MQ=255) tgctgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTgg < 1:43453405/68‑1 (MQ=255) gctgGACGAGTAAGTGTGAAGTTTCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGc < 1:48289129/68‑1 (MQ=255) gctgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGc < 1:44491945/68‑1 (MQ=255) gctgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGc < 1:56172454/68‑1 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCgtgt < 1:13146085/67‑1 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:39804199/1‑68 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:30476414/1‑68 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:54286656/1‑68 (MQ=255) aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGAGGTTGGCGTGtt > 1:57464065/1‑68 (MQ=255) cGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt < 1:39488147/67‑1 (MQ=255) cGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGtt > 1:36944478/1‑67 (MQ=255) tAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCa > 1:8328718/1‑66 (MQ=255) taaaaatgccaTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGGTTCAGCt < 1:29687690‑M1/57‑1 (MQ=255) aaGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAg < 1:5890628/66‑1 (MQ=255) aGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCtt > 1:35424427/1‑68 (MQ=255) gtgtGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTg > 1:23233478/1‑68 (MQ=255) tgtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGa > 1:10555878/1‑68 (MQ=255) gtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGa < 1:4399591/67‑1 (MQ=255) gtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAg < 1:47469946/68‑1 (MQ=255) gtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAg > 1:38560090/1‑68 (MQ=255) gtgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAg > 1:14224267/1‑68 (MQ=255) gAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAgg < 1:11477697/67‑1 (MQ=255) gAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGt < 1:31925761/68‑1 (MQ=255) aGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTg > 1:20589073/1‑68 (MQ=255) aGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTg > 1:19465359/1‑68 (MQ=255) aGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTg > 1:13458925/1‑68 (MQ=255) gTTGCCGGATGTGTTGCTTCCGGCATGGCATTTTTATTTGTGGGTGGCGTGTTTCAGCTTGAGGTTgg > 1:27678089/1‑68 (MQ=39) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:33667128/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:8854323/1‑68 (MQ=255) gTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg > 1:9496684/1‑68 (MQ=255) TGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGa > 1:24896004‑M1/1‑67 (MQ=255) | CGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGA > CP009273/138397‑138530 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |