| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1280805 | 608 (0.870) | 34 (0.060) | 5/96 | NT | 6.2% | coding (211/711 nt) | narJ | molybdenum‑cofactor‑assembly chaperone subunit (delta subunit) of nitrate reductase 1 |
| ? | CP009273 | = 1280852 | 512 (0.850) | coding (258/711 nt) | narJ | molybdenum‑cofactor‑assembly chaperone subunit (delta subunit) of nitrate reductase 1 | |||||
Only 100 of 996 total aligned reads displayed.
GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGATGGTGGA > CP009273/1280739‑1280872 | gATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:26775702‑M1/67‑1 (MQ=255)gATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:28295752‑M1/67‑1 (MQ=255)gATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:56127912‑M1/67‑1 (MQ=255)gATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCG < 1:35872349‑M1/67‑1 (MQ=255) ttAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCAc < 1:7185638/68‑1 (MQ=255) ttAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCAc < 1:34831692/68‑1 (MQ=255) ttAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCAc < 1:56741505/68‑1 (MQ=255) tAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACg < 1:4179148/68‑1 (MQ=255) tAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACg < 1:42577007/68‑1 (MQ=255) acgacgATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc < 1:5730602/68‑1 (MQ=255) acgacgATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:4007511/1‑68 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:17546128/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:27161536/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:1903631/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:49783164/1‑66 (MQ=255) gacgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTACGACCGTGGCCGCGCCACGTc > 1:21672799/1‑66 (MQ=255) acgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTc > 1:15675349/1‑65 (MQ=255) cgaTGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACt < 1:4539804/67‑1 (MQ=255) ggATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGc < 1:31225652/68‑1 (MQ=255) aTCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCCCGGtt > 1:10138229/1‑64 (MQ=255) aTCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGtt > 1:47884531/1‑64 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGgtcgcgggattcgccgt > 1:29103156‑M1/1‑50 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTg < 1:12225353/67‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:14470760/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:22720443/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:58008356/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt < 1:27730305/68‑1 (MQ=255) tCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGt > 1:6784436/1‑68 (MQ=255) cGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGttt < 1:43920093/68‑1 (MQ=255) cTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGa > 1:9301201/1‑68 (MQ=255) tCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGaa < 1:53380172/68‑1 (MQ=255) tCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGa < 1:4923158/67‑1 (MQ=255) tCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGa > 1:17980850/1‑67 (MQ=255) tCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGa > 1:37128278/1‑67 (MQ=255) gctGCCCAGGCGCAGTACAGCGAACTGATCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACa < 1:28032618/66‑1 (MQ=255) gATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACa < 1:1324061/68‑1 (MQ=255) gATGCCCAGGATCAGTACATCGAACTGTTCGACCGTGGCGGCGCCACTTCACTGTTTCTGTTTGAACa < 1:13605728/68‑1 (MQ=255) tGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACAtg < 1:55406934/68‑1 (MQ=255) gCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCCCTGTTGCTGTTTGAACAtgt > 1:6297087/1‑68 (MQ=255) gCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACAtgt > 1:20479570/1‑68 (MQ=255) gCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACAtgt > 1:46324132/1‑68 (MQ=255) gCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACAtgt > 1:24120408/1‑68 (MQ=255) ccAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACAtgtg < 1:19762182/67‑1 (MQ=255) cgcAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGc > 1:35294324/1‑68 (MQ=255) cgcAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGGCACTGTTGCTGTTTGAAAATGTGCACGGc > 1:39186348/1‑68 (MQ=255) gcAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCg > 1:32215479/1‑68 (MQ=255) gcAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCg > 1:36589271/1‑68 (MQ=255) gcAGTACAGCGAACTGTTCGACCGGGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCg < 1:15306290/68‑1 (MQ=255) cAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCg < 1:24849779/67‑1 (MQ=255) aCAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATc < 1:33825717/67‑1 (MQ=255) gCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgc > 1:50527717/1‑68 (MQ=255) gAACTGTTCGACCGTGGCCGCGgtcgcgggattcgccgtgcacatgttcaaaccgcaacagtgacgtg > 1:40901548‑M1/1‑22 (MQ=255) gAACTGTTCGACCGTGGCCGCGgtccgcggattagccgtgcacatgttcaaacagcaacattgacgtg > 1:52941363‑M1/1‑22 (MQ=255) gAACTGTTCGACCGTGGCCGCGggcgcggggttcgccgggcacatgttcaaacagcaacagtgacgtg > 1:55606826‑M1/1‑22 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCCCGGCGAATCCcgcg > 1:16428976/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATccc < 1:22342406/64‑1 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:46580284/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:25336203/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:43567624/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:18369726/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:39610655/1‑67 (MQ=255) gAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCcgcg > 1:8636502/1‑67 (MQ=255) aCTGTTCGACCGTGGCCGCGgtcgcggggttcgccgtgcacatgttcaaaccgcaacagtgacgtggc > 1:31659721‑M1/1‑20 (MQ=255) aCTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACc < 1:16680956‑M2/68‑2 (MQ=255) aCTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACc < 1:47348640‑M2/68‑2 (MQ=255) aCTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACc < 1:48476404‑M2/68‑2 (MQ=255) aCTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATACCGCGACc < 1:33134057‑M2/68‑2 (MQ=255) tCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGTATCCCGCGACcgcgg > 1:9027933‑M2/1‑62 (MQ=255) tCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcgg > 1:44852114‑M2/1‑62 (MQ=255) tCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcgg > 1:3056121‑M2/1‑62 (MQ=255) catcgccTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGc > 1:54479523‑M1/8‑68 (MQ=255) aCCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAg > 1:3843400/1‑68 (MQ=255) aCCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAg > 1:36170351/1‑68 (MQ=255) aCCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAg > 1:12686654/1‑68 (MQ=255) aCCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAg > 1:32772761/1‑68 (MQ=255) ccGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAg < 1:52150664/67‑1 (MQ=255) ccGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAg < 1:52553164/67‑1 (MQ=255) cGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGc > 1:48880657/1‑68 (MQ=255) cGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGc < 1:7825360/68‑1 (MQ=255) cGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGc > 1:29548267/1‑68 (MQ=255) cGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGc > 1:25606721/1‑68 (MQ=255) gTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACcgcggccacggt > 1:10703881‑M2/1‑56 (MQ=255) GGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAt > 1:51582740‑M1/1‑68 (MQ=255) GGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAt > 1:23416240‑M1/1‑68 (MQ=255) GGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAt > 1:11975097‑M1/1‑68 (MQ=255) GGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAt > 1:34502719‑M1/1‑68 (MQ=255) GCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtg < 1:51071669‑M1/68‑1 (MQ=255) GCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtg < 1:33470901‑M1/68‑1 (MQ=255) CCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtgg < 1:37796214‑M1/68‑1 (MQ=255) CCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtg > 1:45744648‑M1/1‑67 (MQ=255) CCGCGCCACGTCACTGTTGCTGTATGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGAtgg < 1:4442136‑M1/68‑1 (MQ=255) cgcggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaac > 1:43150442‑M1/1‑4 (MQ=255) cgcggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaac < 1:30168901‑M1/68‑65 (MQ=255) gcggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaaca < 1:14968501‑M1/68‑66 (MQ=255) ggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaacagt < 1:26362332‑M1/68‑68 (MQ=255) ggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaacagt < 1:11095651‑M1/68‑68 (MQ=255) ggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaacagt < 1:11450394‑M1/68‑68 (MQ=255) ggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaacagt < 1:21363429‑M1/68‑68 (MQ=255) ggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaacagt < 1:5517792‑M1/68‑68 (MQ=255) ggtcgcgggattcgccgtgcacatgttcaaacagcaacagtgacgtggcgcggccacggtcgaacag < 1:54105853‑M1/67‑67 (MQ=255) | GATTTAACGACGATGGATCCGCTCGATGCCCAGGCGCAGTACAGCGAACTGTTCGACCGTGGCCGCGCCACGTCACTGTTGCTGTTTGAACATGTGCACGGCGAATCCCGCGACCGCGGCCAGGCGATGGTGGA > CP009273/1280739‑1280872 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |