| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2161385 | 814 (1.160) | 35 (0.060) | 13/90 | NT | 5.1% | intergenic (‑90/+85) | yegZ/yegR | pseudogene, gpD phage P2‑like protein D/uncharacterized protein |
| ? | CP009273 | = 2161396 | 653 (1.160) | intergenic (‑101/+74) | yegZ/yegR | pseudogene, gpD phage P2‑like protein D/uncharacterized protein | |||||
Only 100 of 1346 total aligned reads displayed.
AAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGAC > CP009273/2161318‑2161451 | cccTATCTCTGGTAACCGTCTTCCATTGCCCACATCGATAGCATCCTCCTTCATAGCACGATGCCtt > 1:16246658/1‑67 (MQ=255) cccTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCttt > 1:32115244/1‑68 (MQ=255) ccTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTc > 1:12508486/1‑68 (MQ=255) aTCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACt < 1:6231263/68‑1 (MQ=255) tctcTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACtt > 1:43131830/1‑68 (MQ=255) tctcTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACtt > 1:50537183/1‑68 (MQ=255) tctcTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACtt > 1:6401446/1‑68 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa < 1:1078018/68‑1 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa > 1:54843197/1‑68 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa > 1:8236916/1‑68 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa > 1:37277699/1‑68 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa > 1:34516092/1‑68 (MQ=255) ctctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa > 1:46859169/1‑68 (MQ=255) tctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa > 1:45622938/1‑67 (MQ=255) tctGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTa > 1:15775735/1‑67 (MQ=255) ggTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCgg > 1:36998685‑M2/1‑66 (MQ=255) gTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggc < 1:15353214‑M2/68‑4 (MQ=255) gTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggc < 1:18586943‑M2/68‑4 (MQ=255) gTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggc < 1:27717761‑M2/68‑4 (MQ=255) tAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggc > 1:20227343‑M2/1‑64 (MQ=255) aaCCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggca < 1:30830584‑M2/67‑5 (MQ=255) aaCCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggca < 1:25827163‑M2/67‑5 (MQ=255) ccGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcg < 1:31107550‑M2/68‑8 (MQ=255) ccGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcg < 1:29742782‑M2/68‑8 (MQ=255) cGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgt > 1:41061410‑M2/1‑60 (MQ=255) cGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgt < 1:3658535‑M2/68‑9 (MQ=255) cGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgt > 1:5227444‑M2/1‑60 (MQ=255) cGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgt > 1:42660431‑M2/1‑60 (MQ=255) cGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgt < 1:24608802‑M2/68‑9 (MQ=255) gTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtg > 1:25091141‑M2/1‑59 (MQ=255) gTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtg > 1:253436‑M2/1‑59 (MQ=255) gTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtg > 1:4862052‑M2/1‑59 (MQ=255) cTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCggcatcgtgct > 1:45067631‑M2/1‑57 (MQ=255) ttCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTc < 1:23962436/68‑1 (MQ=255) ttCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTc < 1:52807945/68‑1 (MQ=255) tCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTcc < 1:8707198/68‑1 (MQ=255) ccATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTcc > 1:40676787/1‑67 (MQ=255) aTTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCcac > 1:2298333/1‑68 (MQ=255) aTTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCcac > 1:28252638/1‑68 (MQ=255) aTTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCcac > 1:19032305/1‑68 (MQ=255) aTTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTGTCACTTATCGGCATCGTGCTCCcac > 1:22072337/1‑68 (MQ=255) tGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAg > 1:55392746/1‑68 (MQ=255) gACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAgg < 1:37789112/68‑1 (MQ=255) gACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAgg < 1:35563180/68‑1 (MQ=255) aCCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:17013466/1‑68 (MQ=255) aCCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:57911281/1‑68 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:12235935/1‑67 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:49554754/1‑67 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:50047604/1‑67 (MQ=255) ccACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGt > 1:53976827/1‑67 (MQ=255) tCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCg > 1:56655548/1‑66 (MQ=255) tCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGc < 1:57476904/68‑1 (MQ=255) tCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGc < 1:21137300/68‑1 (MQ=255) aGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGc > 1:41737136/1‑68 (MQ=255) aaTCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGcac > 1:5143184/1‑68 (MQ=255) aTCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGcaca < 1:49173264/68‑1 (MQ=255) aTCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGcaca < 1:14377625/68‑1 (MQ=255) aTCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGcaca < 1:20671837/68‑1 (MQ=255) aTCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGaaca < 1:13559139/68‑1 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAg > 1:6838834/1‑67 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAg > 1:36089778/1‑67 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAg > 1:14044371/1‑67 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGc < 1:21736653/68‑1 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGc < 1:43589895/68‑1 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGc < 1:34115233/68‑1 (MQ=255) cctcctTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGc < 1:14807517/68‑1 (MQ=255) cATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAAcg < 1:55956321/68‑1 (MQ=255) cATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAAc > 1:17983197/1‑67 (MQ=255) cATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACACCCAGAAc > 1:33303907/1‑67 (MQ=255) aTAGCACGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatgga > 1:9373902‑M1/1‑13 (MQ=255) aTAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAAcgc > 1:47476969/1‑68 (MQ=255) aGCATGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACgcgc > 1:53329229/1‑68 (MQ=255) aGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACgcgc > 1:1012177/1‑68 (MQ=255) aGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACgcgc > 1:38253235/1‑68 (MQ=255) aGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACgcgc > 1:38815621/1‑68 (MQ=255) gCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCa > 1:50949739/1‑68 (MQ=255) cACGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagac > 1:54643528‑M1/1‑9 (MQ=255) aCGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacg > 1:26942110‑M1/1‑8 (MQ=255) aCGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacg > 1:11499062‑M1/1‑8 (MQ=255) aCGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagac < 1:17465390‑M1/67‑60 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata > 1:1183268/1‑68 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata > 1:29404150/1‑68 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata > 1:4405659/1‑68 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata > 1:44445153/1‑68 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCata > 1:47872620/1‑68 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGAACAGCCAGAACGCGCata > 1:46071418/1‑68 (MQ=255) aCGATGCCTTTCACTTATCGGCATCGTGCTACCACAGGTTCCGGCTACGCACAGCCAGCACGCGCata > 1:7328389/1‑68 (MQ=255) cGATGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacgg < 1:39476584‑M1/68‑62 (MQ=255) cGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCatat < 1:40193521/68‑1 (MQ=255) cGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCatat < 1:23403514/68‑1 (MQ=255) cGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCatat < 1:13091996/68‑1 (MQ=255) aTGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATAttt > 1:51926449/1‑68 (MQ=255) aTGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATAttt > 1:30174654/1‑68 (MQ=255) tGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacggtta < 1:42390032‑M1/68‑65 (MQ=255) tGCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacggtt < 1:31454018‑M1/67‑64 (MQ=255) gCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacggttac < 1:35014141‑M1/68‑66 (MQ=255) gCCgataagtgaaaggcatcgtgctatgaaggaggattctatcgatgtggtcaatggaagacggttac < 1:28799300‑M1/68‑66 (MQ=255) gCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTg > 1:19691093/1‑67 (MQ=255) gCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTg > 1:32627334/1‑67 (MQ=255) cTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGAc < 1:26359086/67‑1 (MQ=255) | AAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCCTTTCACTTATCGGCATCGTGCTCCCACAGGTTCCGGCTACGCACAGCCAGAACGCGCATATTTGAC > CP009273/2161318‑2161451 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |