| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2930783 = | NA (NA) | 23 (0.040) | 12/90 | NT | NA | intergenic (+65/‑14) | fucI/fucK | L‑fucose isomerase/L‑fuculokinase |
| ? | CP009273 | 2930811 = | NA (NA) | coding (15/1449 nt) | fucK | L‑fuculokinase | |||||
Only 100 of 1445 total aligned reads displayed.
TAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGT > CP009273/2930716‑2930849 | cctgacattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaatat < 1:45679319‑M1/1‑1 (MQ=255) tgacattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAg > 1:30545093‑M1/66‑68 (MQ=255) tACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAg > 1:25456831/1‑67 (MQ=255) tACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAg > 1:28362058/1‑67 (MQ=255) gacattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGc > 1:15590645‑M1/65‑68 (MQ=255) acattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGcc < 1:4187398‑M1/5‑1 (MQ=255) acattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGcc < 1:55684172‑M1/5‑1 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:11488546/1‑68 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:17999065/1‑68 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:49382423/1‑68 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTAACGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:38964148/1‑68 (MQ=255) cattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGcc > 1:6492300‑M1/63‑67 (MQ=255) cattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCg < 1:17027688‑M1/6‑1 (MQ=255) attggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCgg > 1:413879‑M1/62‑68 (MQ=255) attggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCgg > 1:18439741‑M1/62‑68 (MQ=255) attggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCgg > 1:17516415‑M1/62‑68 (MQ=255) attggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCgg > 1:584553‑M1/62‑68 (MQ=255) ttACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGa < 1:48954307/68‑1 (MQ=255) ggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATa > 1:24966687‑M1/59‑68 (MQ=255) ggtcgcgccaaagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGGCGGATa > 1:26397397‑M1/59‑68 (MQ=255) aCTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa > 1:32869346/1‑68 (MQ=255) gtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATa < 1:27446514‑M1/10‑1 (MQ=255) gtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATa < 1:44302987‑M1/10‑1 (MQ=255) cTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa < 1:46172735/68‑1 (MQ=255) cTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa < 1:8646014/68‑1 (MQ=255) tcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATaa > 1:43890501‑M1/57‑67 (MQ=255) tCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa > 1:49937820/1‑67 (MQ=255) tCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa > 1:23649639/1‑67 (MQ=255) tCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa > 1:7774055/1‑67 (MQ=255) tCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa > 1:52874275/1‑67 (MQ=255) cccTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGTTTAGCCGGATAAga > 1:37641329/1‑67 (MQ=255) cccTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc > 1:34177735/1‑68 (MQ=255) cTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCaa > 1:47249419/1‑68 (MQ=255) cTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCaa > 1:36466657/1‑68 (MQ=255) tgatgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAAt < 1:2408074/68‑1 (MQ=255) tgatgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAAt < 1:57736313/68‑1 (MQ=255) gatgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATg > 1:40403291/1‑68 (MQ=255) gatgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATg > 1:53329579/1‑68 (MQ=255) gatgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATg > 1:18965708/1‑68 (MQ=255) atgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGt > 1:36890326/1‑68 (MQ=255) atgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGt > 1:13758288/1‑68 (MQ=255) atgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGt > 1:12933654/1‑68 (MQ=255) atgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGt > 1:22788463/1‑68 (MQ=255) tgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt > 1:47524710/1‑68 (MQ=255) tgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt > 1:52105327/1‑68 (MQ=255) tgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt > 1:1447365/1‑68 (MQ=255) tgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt > 1:53783216/1‑68 (MQ=255) gtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTa > 1:46848985/1‑68 (MQ=255) gtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTa > 1:26984648/1‑68 (MQ=255) gtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTa > 1:34884742/1‑68 (MQ=255) gtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTa > 1:1640158/1‑68 (MQ=255) gatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAt > 1:55182960/1‑67 (MQ=255) gCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg > 1:51711809/1‑67 (MQ=255) cccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg > 1:56787003/1‑66 (MQ=255) cccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg > 1:38634965/1‑66 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGc < 1:10066234/67‑1 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGc < 1:50976097/67‑1 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGc < 1:3344952/67‑1 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCt > 1:11028175/1‑68 (MQ=255) ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:56271350/68‑1 (MQ=255) accaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATAAGCAATGTTTTGCGGCtat < 1:29492716‑M1/29‑1 (MQ=255) tCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata < 1:40843170/67‑1 (MQ=255) tCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata < 1:2040836/67‑1 (MQ=255) tCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata < 1:48639297/67‑1 (MQ=255) tCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata < 1:45110830/67‑1 (MQ=255) tCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata < 1:149950/67‑1 (MQ=255) tACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCg < 1:35332616/68‑1 (MQ=255) tACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCg < 1:39600618/68‑1 (MQ=255) ccGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt < 1:2310933/68‑1 (MQ=255) ccTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGa > 1:13386527/1‑68 (MQ=255) gAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAAc < 1:19853906/68‑1 (MQ=255) aCAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaa > 1:30021321/1‑68 (MQ=255) aCAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaa > 1:42395878/1‑68 (MQ=255) aCAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACa < 1:25746096/67‑1 (MQ=255) aCAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACa < 1:42947235/67‑1 (MQ=255) agcaagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaagaa < 1:729740/68‑1 (MQ=255) gcaagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata < 1:6689861/41‑1 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:24454491/1‑68 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:11961663/1‑68 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:50578997/1‑68 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:48057590/1‑68 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:27844504/1‑68 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:32382920/1‑68 (MQ=255) gagTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTa > 1:21451006/1‑67 (MQ=255) gagTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTa > 1:43349720/1‑67 (MQ=255) agTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTAt > 1:35768230/1‑67 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTAt > 1:10521068/1‑66 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTAt > 1:54607059/1‑66 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTAt < 1:28804183/66‑1 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATc < 1:9216899/67‑1 (MQ=255) taTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTgg < 1:15963607‑M1/66‑1 (MQ=255) TAGCCGGATAAGCAATGTTCTCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:2092677‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:54065439‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:44656334‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:37162825‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:57130809‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:31496430‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:31189766‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:22295803‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:12320864‑M1/1‑67 (MQ=255) | TAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGT > CP009273/2930716‑2930849 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |