| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3701786 | 168 (0.240) | 10 (0.020) | 7/88 | NT | 7.0% | intergenic (‑721/+190) | dppA/proK | dipeptide transporter/tRNA‑Pro |
| ? | CP009273 | = 3701789 | NA (NA) | intergenic (‑724/+187) | dppA/proK | dipeptide transporter/tRNA‑Pro | |||||
Only 100 of 407 total aligned reads displayed.
TCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCG > CP009273/3701719‑3701853 | tcgagtcgaACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTC > 1:3264278‑M1/1‑68 (MQ=255) aGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCaacgcgcaggcgtttttgcagctg > 1:10907858‑M1/1‑43 (MQ=255) cTCATGAGCTGCAGATGCAAAAAAGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgagg > 1:31644885‑M1/1‑32 (MQ=255) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:3144003/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc < 1:21720958/67‑1 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:32492255/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:19688814/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:34917683/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:39856374/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:42248629/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:4412593/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:48636567/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:50928358/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:52888911/1‑67 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc < 1:55251289/67‑1 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTAc > 1:57949304/1‑67 (MQ=33) cTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTc > 1:40354342/1‑68 (MQ=37) tGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTc > 1:47627965/1‑67 (MQ=37) tGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTc > 1:38512693/1‑67 (MQ=37) tGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTc < 1:22431041/67‑1 (MQ=37) tGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCg < 1:7179504/68‑1 (MQ=39) aGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGcc > 1:3561372/1‑67 (MQ=255) aGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGcc < 1:54184401/67‑1 (MQ=255) aGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGcc > 1:29609026/1‑67 (MQ=255) aGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGcc > 1:621845/1‑67 (MQ=255) aGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGcc < 1:6730197/67‑1 (MQ=255) aGATGCAAAAAAGCCTGCTCGGTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGcc > 1:43229838/1‑67 (MQ=255) aTGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACt > 1:50007071/1‑68 (MQ=255) tGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACtt < 1:46897823/68‑1 (MQ=255) tGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACt > 1:18124195/1‑67 (MQ=255) ccaaaagcCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggc < 1:49654183‑M1/66‑55 (MQ=255) aaaaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTgg < 1:28875244/68‑1 (MQ=255) aaaaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTgg < 1:25853188/68‑1 (MQ=255) aaaaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTgg < 1:9658217/68‑1 (MQ=255) aaaaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTgg < 1:18979013/68‑1 (MQ=255) aaaaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTgg < 1:14175869/68‑1 (MQ=255) aaaaGCCTGCTCGGTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTgg < 1:2700888/68‑1 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagg < 1:15504910‑M1/68‑58 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagg < 1:45293611‑M1/68‑58 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagg < 1:8232127‑M1/68‑58 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagg > 1:14767887‑M1/1‑11 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagg > 1:17632724‑M1/1‑11 (MQ=255) aaaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagg < 1:39629926‑M1/68‑58 (MQ=255) aaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcaggg > 1:33084181‑M1/1‑10 (MQ=255) aaGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcaggg > 1:48303932‑M1/1‑10 (MQ=255) aaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGc > 1:11588709/1‑67 (MQ=255) aGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcaggga > 1:20155671‑M1/1‑9 (MQ=255) aGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcaggga > 1:44895808‑M1/1‑9 (MQ=255) aGCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcaggga > 1:37656555‑M1/1‑9 (MQ=255) aGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTc < 1:2528982/68‑1 (MQ=255) gCCTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggag > 1:48843005‑M1/1‑8 (MQ=255) gCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTc > 1:39102560/1‑67 (MQ=255) gCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTc > 1:50511541/1‑67 (MQ=255) gCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTc > 1:8935429/1‑67 (MQ=255) gCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTc > 1:54859892/1‑67 (MQ=255) ccTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg > 1:5901165‑M1/1‑7 (MQ=255) ccTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg > 1:55676953‑M1/1‑7 (MQ=255) ccTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg > 1:51191473‑M1/1‑7 (MQ=255) ccTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg > 1:53316288‑M1/1‑7 (MQ=255) ccTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg > 1:9071032‑M1/1‑7 (MQ=255) ccTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg < 1:54655069‑M1/68‑62 (MQ=255) ccTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg > 1:16964987‑M1/1‑7 (MQ=255) ccTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg > 1:3451424‑M1/1‑7 (MQ=255) ccTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg > 1:31085455‑M1/1‑7 (MQ=255) ccTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg > 1:27675212‑M1/1‑7 (MQ=255) ccTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg > 1:40660524‑M1/1‑7 (MQ=255) ccTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg > 1:23909197‑M1/1‑7 (MQ=255) ccTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacccccgggggcagggagg > 1:23500581‑M1/1‑7 (MQ=255) ccTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCg > 1:32161576/1‑67 (MQ=255) cTGCTCcacgcgcaggcttttttgcatctgcagctcatgaggatgagaaccgccgggggcagggagg < 1:34004434‑M1/67‑62 (MQ=255) cTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggt < 1:24669347‑M1/68‑63 (MQ=255) cTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggt < 1:2745797‑M1/68‑63 (MQ=255) cTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggt < 1:27925220‑M1/68‑63 (MQ=255) cTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggt > 1:5391288‑M1/1‑6 (MQ=255) cTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg < 1:36450229‑M1/67‑62 (MQ=255) cTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg < 1:13848761‑M1/67‑62 (MQ=255) cTGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggagg < 1:28175540‑M1/67‑62 (MQ=255) cTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGTGGATTACTCGCCACTTCGTGGCTCGc < 1:1311912/67‑1 (MQ=255) cTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGc < 1:30611200/67‑1 (MQ=255) cTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGGGGCTCGc < 1:40255938/67‑1 (MQ=255) tGCTCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggtt < 1:36017913‑M1/68‑64 (MQ=255) tGCGCGTTGAGCAGGCTTTTCGAATTTGGGCGGTGATAGAGGATTACTCGCCACTTCGTGGCGCGccc < 1:52593668/68‑1 (MQ=21) gCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCt < 1:20922431/68‑1 (MQ=255) gCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCt < 1:56742912/68‑1 (MQ=255) gCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCt < 1:42054937/68‑1 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcga < 1:37243220‑M1/68‑67 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcg > 1:24978147‑M1/1‑2 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcg > 1:33302337‑M1/1‑2 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcg > 1:26137313‑M1/1‑2 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcg > 1:42938854‑M1/1‑2 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcg > 1:33363980‑M1/1‑2 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcg < 1:49263464‑M1/67‑66 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcg > 1:10110776‑M1/1‑2 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcg < 1:14306852‑M1/67‑66 (MQ=255) tCaacgagcaggcttttttgcatctgcagctcatgaggatgagaacctccgggggcagggaggttcg > 1:42631571‑M1/1‑2 (MQ=255) tCaacgagcaggcttttttgcatctgcagcgcatgaggatgagaacctccgggggcagggaggttcga < 1:55096134‑M1/68‑67 (MQ=255) tCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTga > 1:7803215/1‑67 (MQ=255) tCGTTGAGCAGGCTTTTCGAATTTGGTCGGGGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGc > 1:8426298/1‑68 (MQ=255) gcaacgagcaggcttttttgcatctgcagctcatgaggaggagaacctccgggggcagggaggttcga < 1:57428663‑M1/67‑67 (MQ=255) cGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCg > 1:41390606/1‑68 (MQ=255) | TCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTACTCGCCACTTCGTGGCTCGCCCTGCG > CP009273/3701719‑3701853 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |