| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4034088 = | NA (NA) | 15 (0.030) | 7/94 | NT | 100% | intergenic (+92/+178) | rrfA/mobB | 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B |
| ? | CP009273 | 4034093 = | 0 (0.000) | intergenic (+97/+173) | rrfA/mobB | 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B | |||||
Only 100 of 1294 total aligned reads displayed.
GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAG > CP009273/4034028‑4034160 | ttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcg > 1:21578542‑M2/66‑68 (MQ=255)ttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcg > 1:23987121‑M2/66‑68 (MQ=255)ttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcg > 1:3150724‑M2/66‑68 (MQ=255)ttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggc < 1:26516389‑M2/2‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa > 1:38428489‑M2/64‑68 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:22058013‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:23629599‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:24892791‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:27685974‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:28364284‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:29701592‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:30303151‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:10361654‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:39308270‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:39616384‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:44769638‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:4844188‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:4885180‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:50368741‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:52775045‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:54663104‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:57231653‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:840386‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa > 1:972820‑M2/64‑68 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:21207462‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:11433720‑M2/5‑1 (MQ=255) atggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa > 1:12027937‑M2/64‑68 (MQ=255) acggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGa < 1:12547151‑M2/5‑1 (MQ=255) tggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGgag > 1:43726686‑M2/63‑67 (MQ=255) tggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAt > 1:30809191‑M2/63‑68 (MQ=255) tggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAt > 1:36818120‑M2/63‑68 (MQ=255) tggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAt > 1:14546963‑M2/63‑68 (MQ=255) ggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAtt > 1:56026221‑M2/62‑68 (MQ=255) ggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAtt > 1:54192695‑M2/62‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcgcgGCGGAttt > 1:200939‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGGGGAttt > 1:16254754‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGtttt > 1:10007403‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:44337029‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:42933304‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:42319897‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:41685845‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:41364987‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:45427695‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:46171185‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:47015621‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:14148062‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:13789219‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:49815943‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:13123968‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:51041154‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:51810970‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:52331754‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:53232357‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:5384506‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:55276568‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:6114073‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:7113090‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:7879022‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:8686043‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:92225‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:19125956‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:3201066‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:40842927‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:1797101‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:29237648‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:28782756‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:18218333‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:18623963‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:26952575‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:17227340‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:25938290‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:2543324‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:19504309‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:24405637‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:20585899‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:2310872‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:22531517‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:36277675‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:4044128‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:39966428‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:14994470‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:15813141‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:37843501‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:37325264‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:32511103‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:35662584‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:34969645‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:33928495‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt > 1:33108805‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatacgctcccgGCGGAttt > 1:34418228‑M2/61‑68 (MQ=255) gcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttaaaatccgctcccgGCGGAttt > 1:10999388‑M2/61‑68 (MQ=255) cgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt < 1:47596485‑M2/8‑1 (MQ=255) cgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccgGCGGAttt < 1:38815879‑M2/8‑1 (MQ=255) cgggcggcctgcccgccaccctccgggctgttgcttcgcaacgttcaaatccgctcccgGCGGAttt < 1:5640935‑M2/8‑1 (MQ=255) gggcggcctgcccgccaccccccgggccgttgcttcgcaacgttcaaaaccgctcccgGCGGATTTg < 1:55521118‑M2/9‑1 (MQ=255) cctgcccgccacccgccgggccgttgcttcgcaacgttcaaatccgcccccgGCGGATTTGAACGtt < 1:16774762‑M2/15‑1 (MQ=255) gcGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGc < 1:49293551‑M2/65‑1 (MQ=255) GCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAg > 1:46582758‑M2/1‑68 (MQ=255) GCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAg > 1:5794769‑M2/1‑68 (MQ=255) GCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAg > 1:6630593‑M2/1‑68 (MQ=255) | GGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAG > CP009273/4034028‑4034160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |