| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4161825 = | NA (NA) | 33 (0.060) | 8/96 | NT | 100% | intergenic (+141/‑160) | rrfB/murB | 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding |
| ? | CP009273 | 4161830 = | 0 (0.000) | intergenic (+146/‑155) | rrfB/murB | 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding | |||||
Only 100 of 443 total aligned reads displayed.
GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTT > CP009273/4161764‑4161897 | aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctg > 1:38021521‑M2/67‑67 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctg > 1:16874562‑M2/67‑67 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:30426288‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:21330953‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:21517332‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:21745703‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:22973079‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:23850622‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:7887205‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:2744066‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:51776805‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:27114339‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:31978118‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:32297012‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:34848371‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:39631883‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:42411647‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:43078500‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:46924632‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:2058996‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:5304642‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:1781625‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:20802503‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:9187198‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:14030073‑M2/2‑1 (MQ=255)aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:8862185‑M2/2‑1 (MQ=255)aaaaggccatccggcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:52268162‑M2/2‑1 (MQ=255)aaaaggccatccgacaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:25867426‑M2/2‑1 (MQ=255)aaaaggccaaccgtcaggatggccttctgcttaatttgatgcctcgcagtttatggcgggcgtcctGc < 1:36176910‑M2/2‑1 (MQ=255)aaaagcccatccgtcaggatggccttctgcttaatatgaagcctggcagtttatggcgggcgtcctGc < 1:54256688‑M2/2‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:36450195‑M2/3‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:14665592‑M2/3‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:57391817‑M2/3‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc > 1:13048727‑M2/66‑67 (MQ=255) tccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATaa < 1:35177925‑M2/11‑1 (MQ=255) tccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATaa < 1:44017256‑M2/11‑1 (MQ=255) ttctgcttaatttgctgcctggcattttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:7659529‑M2/26‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:16301776‑M2/26‑1 (MQ=255) ttctgcttaaattgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:50440531‑M2/26‑1 (MQ=255) taatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCAAATTAAGc < 1:51370331‑M2/33‑1 (MQ=255) taatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCAAATTAAGc < 1:26825587‑M2/33‑1 (MQ=255) taatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCAAATTAAGc < 1:2623740‑M2/33‑1 (MQ=255) aCGCCCGCCATAAACTGCCAGGCATCAATTTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:41648706/1‑68 (MQ=18) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGATGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:15327533/1‑68 (MQ=18) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:57107638/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:44764220/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:45537208/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:54641379/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:33952482/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:3349463/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:22461555/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:49857009/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:23210159/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:56854161/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCGTTTTGCGt > 1:2482733/1‑68 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGTTGGCCTTTTTGCGtt > 1:48404386/1‑68 (MQ=25) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:9589765/1‑68 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:14179923/1‑68 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:27696968/1‑68 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt < 1:10231545/68‑1 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:56137695/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:49328060/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:55145468/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:49498766/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:56364951/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:49743734/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:47472341/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:42089687/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:40924978/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:38825160/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg < 1:46070936/68‑2 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:30819395/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:1134310/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:2920254/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:6643136/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:14981344/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:15926311/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:19585432/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAACCAGAAGGCCATCCTGACGGCTGGCCTTTTTGCGtg > 1:18911494/1‑67 (MQ=11) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:36297538‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:56594785‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:8573157‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:7011350‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:58021028‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:57684951‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:53811146‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:53240454‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:50863506‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:40480659‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:37165976‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:31187035‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:3014950‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:28400456‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:28081708‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:25324207‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:24322482‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:22284357‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:12353749‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:1092823‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCgtg > 1:15588090‑M2/1‑66 (MQ=255) | GGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTT > CP009273/4161764‑4161897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |