New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	360168 =	NA (NA)	131 (0.220)	16/94	NT	NA	intergenic (‑102/+493)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor
	?	CP009273	360191 =	NA (NA)					intergenic (‑125/+470)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor

CCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTC  >  CP009273/360135‑360245                                                         |                                                       ccaccACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGga                                             >  1:21662959/4‑68 (MQ=1)       ccgtCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGATCGt                                       <  1:22569803/65‑1 (MQ=0)                cccttGCTTCGCAACGTTCAAATCCGCTCCCGCCGGATTTGTCCTACTCAGGAGAGCGTTCACCGac                               <  1:54294678/64‑1 (MQ=0)                        tctcAACGTTCAAATCCGCTCCAGTCGTATTTGTCCTACTCAGGATAGCGTTAACCGACAAACAACAg                      <  1:17185511/65‑1 (MQ=1)                                           tctcggcggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGt   <  1:54382382/65‑1 (MQ=1)                                            ccgggcggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGTTAAAACGAAAGGCCCAGTc  <  1:13472296/65‑1 (MQ=0)                                            ccgggcggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTc  <  1:56462754/65‑1 (MQ=1)                                                         |                                                       CCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTC  >  CP009273/360135‑360245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.