| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 426562 | NA (NA) | 11 (0.020) | 6/90 | NT | NA | intergenic (+154/+23) | yajD/tsx | HNH nuclease family protein/nucleoside channel, receptor of phage T6 and colicin K |
| ? | CP009273 | = 426567 | NA (NA) | intergenic (+159/+18) | yajD/tsx | HNH nuclease family protein/nucleoside channel, receptor of phage T6 and colicin K | |||||
Only 100 of 805 total aligned reads displayed.
AAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAA > CP009273/426500‑426634 | aGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAt > 1:31715334‑M2/1‑67 (MQ=255) cGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtc < 1:19573401‑M2/67‑3 (MQ=255) cGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtc < 1:46414864‑M2/67‑3 (MQ=255) cGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtc < 1:29889434‑M2/67‑3 (MQ=255) cGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtc < 1:14577189‑M2/67‑3 (MQ=255) tACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggc > 1:25664984‑M2/1‑61 (MQ=255) cgccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcat < 1:10428084‑M2/68‑10 (MQ=255) cgccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcat < 1:27858889‑M2/68‑10 (MQ=255) cgccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcat < 1:21961256‑M2/68‑10 (MQ=255) cgccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcat > 1:21614049‑M2/1‑59 (MQ=255) cgccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcat < 1:5141716‑M2/68‑10 (MQ=255) cgccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcat > 1:44431439‑M2/1‑59 (MQ=255) gccgcTTCCGGCATGAACAAAGTACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcatt < 1:29417870‑M2/68‑11 (MQ=255) gccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcatt < 1:32511599‑M2/68‑11 (MQ=255) gccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcatt < 1:48558468‑M2/68‑11 (MQ=255) ccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcattt < 1:14799971‑M2/68‑12 (MQ=255) ccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcattt < 1:56078430‑M2/68‑12 (MQ=255) ccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcattt < 1:17425114‑M2/68‑12 (MQ=255) tCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATa > 1:29056160/1‑68 (MQ=255) tCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATa < 1:42422416/68‑1 (MQ=255) ggCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcatttctgattgt > 1:40849039‑M2/1‑49 (MQ=255) ggCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcatttctgattgt > 1:33884580‑M2/1‑49 (MQ=255) gCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCa > 1:34941098/1‑68 (MQ=255) tggtagtaggttacaacttctgattatgaAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGaa < 1:36120382‑M1/39‑1 (MQ=255) gAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAg < 1:27249222/68‑1 (MQ=255) aaCAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGACGt > 1:26584414/1‑68 (MQ=255) aCAAAGCACACGTTGTTAACAATCAGAAATGCCGGGACTAATTCCCGGCATTTTCATAATCAGAAGt < 1:28337279/67‑1 (MQ=255) aCAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGtt > 1:23222349/1‑68 (MQ=255) aCAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGtt > 1:23436147/1‑68 (MQ=255) aCAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGt < 1:28697281/67‑1 (MQ=255) aCAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGt < 1:54096703/67‑1 (MQ=255) aCAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGt < 1:34451736/67‑1 (MQ=255) aCAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGt < 1:11621345/67‑1 (MQ=255) aCAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGt < 1:16242695/67‑1 (MQ=255) cAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAtcccggcatttctgattgttaacaacg > 1:24014792‑M2/1‑41 (MQ=255) agtaggttacaacttctgattatgaAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTg < 1:32961428‑M1/43‑1 (MQ=255) agtaggttacaacttctgattatgaAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTg < 1:7139288‑M1/43‑1 (MQ=255) gCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTaa > 1:31302334/1‑67 (MQ=255) gttacaacttctgattatgaAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTaa < 1:45549960‑M1/46‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAcc < 1:3945558/67‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAcc < 1:53269488/67‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAcc < 1:15650354/67‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAcc < 1:54532636/67‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAcc < 1:52814510/67‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAcc < 1:12732078/67‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAc < 1:12064627/66‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAc < 1:41617523/66‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAc < 1:5820027/66‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAc < 1:49230917/66‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAc < 1:38800873/66‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACct < 1:15886771/68‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACct > 1:18940968/1‑68 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACct < 1:1374754/68‑1 (MQ=255) acacGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACct > 1:24554556/1‑68 (MQ=255) cGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACctact > 1:56678077/1‑68 (MQ=255) ttgttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACctactc > 1:52130062/1‑66 (MQ=255) ttgttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACctacta > 1:6665648/1‑67 (MQ=255) ttgttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACctacta > 1:30275859/1‑67 (MQ=255) tgttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCtactac < 1:47521743/67‑1 (MQ=255) tgttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCtactac < 1:310152/67‑1 (MQ=255) tgttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCtactac < 1:18516955/67‑1 (MQ=255) tgttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCtactac < 1:2517353/67‑1 (MQ=255) gttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCa < 1:55653017/68‑1 (MQ=255) gttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCa < 1:6097142/68‑1 (MQ=255) gttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCa < 1:21199915/68‑1 (MQ=255) gttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCa < 1:44846073/68‑1 (MQ=255) ttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAg > 1:8104068/1‑68 (MQ=255) ttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAg > 1:49857788/1‑68 (MQ=255) tAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAgg < 1:50339293/68‑1 (MQ=255) tAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAgg < 1:8582007/68‑1 (MQ=255) tAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAgg > 1:9550462/1‑68 (MQ=255) tAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAgg < 1:18151240/68‑1 (MQ=255) aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt > 1:8986422/1‑68 (MQ=255) aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt > 1:22558770/1‑68 (MQ=255) aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt > 1:42783073/1‑68 (MQ=255) aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGt > 1:53608054/1‑68 (MQ=255) aCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTa > 1:1307105/1‑68 (MQ=255) aCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTa > 1:20843151/1‑68 (MQ=255) aCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTa > 1:16728819/1‑68 (MQ=255) aCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTa < 1:36910147/68‑1 (MQ=255) cAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTaa < 1:35152249/68‑1 (MQ=255) aTCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAacc > 1:32032365/1‑68 (MQ=255) cAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAaccac < 1:40307149/68‑1 (MQ=255) AATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCAcccc > 1:26002883‑M1/1‑67 (MQ=255) AATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCa < 1:43275639‑M1/68‑1 (MQ=255) ATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAg > 1:10894858‑M1/1‑68 (MQ=255) ATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAg > 1:5732525‑M1/1‑68 (MQ=255) ATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAg > 1:43911338‑M1/1‑68 (MQ=255) ATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAg > 1:1342644‑M1/1‑68 (MQ=255) ATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAg > 1:47986361‑M1/1‑68 (MQ=255) TGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTACCcacccccg < 1:46840564‑M1/67‑3 (MQ=255) GCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAgca < 1:37625390‑M1/68‑2 (MQ=255) GCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGcc > 1:3578546‑M1/1‑68 (MQ=255) GCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGcc < 1:10046353‑M1/68‑1 (MQ=255) GCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGcc > 1:50970255‑M1/1‑68 (MQ=255) CGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCgg < 1:55108231‑M1/68‑1 (MQ=255) CGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCgg < 1:41179099‑M1/68‑1 (MQ=255) aTAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTagag < 1:34104746/68‑1 (MQ=255) aTAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTaga > 1:45931858/1‑67 (MQ=255) aTCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGCGCGa > 1:15188065/1‑67 (MQ=255) | AAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAA > CP009273/426500‑426634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |