| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3615349 = | NA (NA) | 10 (0.020) | 8/96 | NT | 100% | coding (2798/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor |
| ? | CP009273 | 3615372 = | 0 (0.000) | coding (2821/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor | |||||
Only 100 of 455 total aligned reads displayed.
CAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCG > CP009273/3615305‑3615439 | ccttccgggatgaggtcggttttctctgtcagcctgccgtgagggtcatacaggtaaagatagggcgc > 1:9581945‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:3645716‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:54804548‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:5368162‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:49577231‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:48563538‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:44286672‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:43635717‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:3970482‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:31593219‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:28310709‑M2/68‑68 (MQ=255)ccttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgc > 1:13280848‑M2/68‑68 (MQ=255) cttccgggatgaggtctgatttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:11173363‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:15717346‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:30142623‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:26391830‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:3348702‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:34586292‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:40044084‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:14103221‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:13766655‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:47877402‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:12576186‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:20268792‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:51708911‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:54551738‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:57993524‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcg < 1:8343858‑M2/2‑1 (MQ=255) cttccgggatgaggtcggttttctctgacagccggccgtgacggtcataccggtaaagatagtgcgcg < 1:2184244‑M2/2‑1 (MQ=255) cttccgggatgagggcggttttctctgtcagcctgccgggacggtcataccggtaaagatagtgcgcg < 1:6746639‑M2/2‑1 (MQ=255) ttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGt < 1:53230030‑M2/3‑1 (MQ=255) ttccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGt < 1:16580594‑M2/3‑1 (MQ=255) ttccgggatgaggtcggttttctctggcagcctgccgtgacggtcataccggtaaagatagtgcgCGt < 1:10600929‑M2/3‑1 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc < 1:6390657‑M2/4‑1 (MQ=255) tccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc < 1:25273092‑M2/4‑1 (MQ=255) tccgggatgaggtcggtgttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc < 1:57881074‑M2/4‑1 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgcgac > 1:43874931‑M2/64‑65 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:26881144‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:42405288‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:19606523‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:36147129‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:34164533‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:34329646‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTc > 1:46325650‑M2/64‑67 (MQ=255) ccgggatgaggtcggttttctctgtcagccagccgtgacggtcatacagctaaagatagtccgCGTc > 1:55716325‑M2/64‑67 (MQ=255) ccgggatgagggcggttttctcggtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCa < 1:23038765‑M2/5‑1 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaaggtagtgcgCGTCAc > 1:38563065‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:21191886‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:42018518‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:27391028‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:49092541‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:53002173‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:18519273‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:6621034‑M2/63‑68 (MQ=255) cgggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCAc > 1:8020157‑M2/63‑68 (MQ=255) gggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACg > 1:28936110‑M2/62‑68 (MQ=255) gggatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACg < 1:54316845‑M2/7‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatcgtgcgCGTCACgg > 1:37424794‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCCCgg > 1:766661‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:39587375‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:16365036‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:8982812‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:56596435‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:18689437‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:11690726‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:10017398‑M2/60‑67 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg < 1:38332963‑M2/8‑1 (MQ=255) gatgaggtcggttttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACgg > 1:43282407‑M2/60‑67 (MQ=255) gaggtgggttttctctgtccgcctgccgtgacggtcataccggtaaagatagggcgCGTCACGGCAgg < 1:28742592‑M2/12‑1 (MQ=255) cggttttctctgtcagcctgccgtgacggtcataccggtaaagatagggcgCGTCACGGCAGGCTGa < 1:34873927‑M2/16‑1 (MQ=255) ttttctctgtcagcctgccgggacggtcataccggtaaagatagtgcgCGTCACGGCAGGCTGACag < 1:26047697‑M2/19‑1 (MQ=255) tttctctgtcagcctgccgtgacggtcataccggtaaagatagtgcgCGTCACGGCAGGCTGACagag < 1:4035734‑M2/21‑1 (MQ=255) CGTCACGGCAGGCTGACAGAGCAACCCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:51121166‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGTTGATGAGCg > 1:50281666‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGcgcg > 1:18979276‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGcgcg > 1:1493468‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:33778209‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:27806568‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:50558850‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:16879570‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:55323752‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:56850502‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGc > 1:44954863‑M2/1‑67 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:3884418‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:24897871‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:1724306‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:17702440‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:37184023‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:30238253‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:31231814‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:15206791‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:43468740‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:23944229‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:32520604‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:5244898‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:32784861‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:2043789‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:22453823‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:47144691‑M2/1‑68 (MQ=255) CGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCg > 1:45665211‑M2/1‑68 (MQ=255) | CAGCACCCTCAGCATGTGGCCGGATAACCGTATCGCCCGTGACGCGCACTATCTTTACCGGTATGACCGTCACGGCAGGCTGACAGAGAAAACCGACCTCATCCCGGAAGGGGTTATCCGCACGGATGATGAGCG > CP009273/3615305‑3615439 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |