New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3613129	NA (NA)	5 (0.010)	5/106	NT	NA	coding (578/4236 nt)	rhsB	Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor
	?	CP009273	= 3613200	NA (NA)					coding (649/4236 nt)	rhsB	Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor

CGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3613060‑3613129 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCGAAGCGGTCCACCAGCCCGGTCAGTAC  <  CP009273/3613200‑3613173                                                                                                    CGCATCGTTGTCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTG                                <  1:8240879/68‑1 CGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTG                                <  1:12691908/68‑1 CGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTG                                <  1:40264511/68‑1 CGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTG                                <  1:39963355/68‑1 CGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTG                                <  1:44613487/68‑1 CGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTG                                <  1:37022732/68‑1 CGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTG                                <  1:50373329/68‑1 CGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTG                                <  1:21043456/68‑1 CGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTG                                <  1:20744373/68‑1 CGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTG                                <  1:1868034/68‑1 CGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTG                                <  1:1002042/68‑1  GCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGC                               <  1:6178841/68‑1  GCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGC                               <  1:18630611/68‑1  GCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGC                               <  1:39421980/68‑1  GCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGC                               <  1:40731455/68‑1  GCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGGGGCTGCTCGGTTGGTGTGAGCGGGTGC                               <  1:19953370/68‑1  GCATCGTTATCTGGCAACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTTAGCGGGTG                                >  1:6554765/1‑67   CATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCC                              >  1:8505877/1‑68    ATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCC                              <  1:39282742/67‑1    ATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCC                              <  1:34867893/67‑1    ATCGTTATCTGGCGACAAACAGGCCGCAGGGGCCGGGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCC                              <  1:18386615/67‑1          ATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCCGAAGCG                       <  1:17705054/68‑1            CTGGCGACAAACAGGCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCCGAAGCGGT                     <  1:35856339/68‑1                           CCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCCGAAGCGGTCCACCAGCCCGG         <  1:43683817/65‑1                             GCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCCGAAGCGGTCCACCAGCCCGGTCAGT    <  1:18195149/68‑1                                  GGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCCCGAAGCGGTCCACCAGCCCGGTCAGTAC  <  1:8173584/65‑1                                                                                                    CGCATCGTTATCTGGCGACAAACAGTCCGCAGGGGCCGTGGTGGCTGCTCGGTTGGTGTGAGCGGGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3613060‑3613129 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCGAAGCGGTCCACCAGCCCGGTCAGTAC  <  CP009273/3613200‑3613173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.