| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4225304 = | NA (NA) | 8 (0.020) | 6/90 | NT | NA | coding (1619/1650 nt) | pgi | glucosephosphate isomerase |
| ? | CP009273 | 4225339 = | NA (NA) | intergenic (+4/‑495) | pgi/yjbE | glucosephosphate isomerase/extracellular polysaccharide production threonine‑rich protein | |||||
Only 100 of 149 total aligned reads displayed.
CGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4225380‑4225304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > CP009273/4225339‑4225405 CGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGC > 1:3751372/1‑68CGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGC > 1:6886946/1‑68CGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGC > 1:40146715/1‑68 GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:10791295/68‑1 GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:8669017/68‑1 GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:36729714/68‑1 GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:23543676/68‑1 GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:30342816/68‑1 GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:22106820/68‑1 GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:42903124/68‑1 GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:42037328/68‑1 GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:1588437/68‑1 GGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG < 1:16171837/68‑1 GGATGCGGCGTGAACGCCTTATCCCGCCAACATATCGACGATGATTAACCGCGCCACGCATTATAGCG > 1:26773341/1‑68 GATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG > 1:28216251/1‑68 GATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG > 1:10434145/1‑68 GATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG > 1:1719336/1‑68 GATGCGGCGTGAACGCCTTAGCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG > 1:16683404/1‑68 ATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGGCACGCTTTATAGCGGT > 1:37751143/1‑68 ATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGG < 1:16219975/67‑1 TGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTT > 1:47586629/1‑68 TGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGT < 1:38601473/67‑1 TGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGT < 1:18978887/67‑1 TGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGT < 1:34602682/67‑1 TGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGT < 1:29008543/67‑1 TGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGT < 1:23181052/67‑1 TGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGT < 1:29582350/67‑1 TGCGGCGGGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGT < 1:30664938/67‑1 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA > 1:942501/1‑68 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA < 1:27799518/68‑1 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA > 1:51239761/1‑68 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA < 1:28542974/68‑1 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA < 1:4498477/68‑1 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA < 1:43061395/68‑1 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA < 1:31524977/68‑1 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA > 1:32569076/1‑68 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA < 1:38407364/68‑1 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA > 1:16890551/1‑68 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA < 1:11699459/68‑1 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTA > 1:15561496/1‑68 GCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTCTATAGCGGTTA > 1:14712593/1‑68 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:27308801/67‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:38841532/67‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:40451033/67‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:41227471/67‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:24067345/67‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:28890543/67‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:24560616/67‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA < 1:45771587/67‑1 GGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAA > 1:48914599/1‑67 CGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCAGGCTTTATAGCGGTTAATCA > 1:15131255/1‑68 CGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCA > 1:42933668/1‑68 CGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCA > 1:46341609/1‑68 CGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCA > 1:17915137/1‑68 CGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCA > 1:17260349/1‑68 CGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCA > 1:22693730/1‑68 CGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATC < 1:50574995/67‑1 TTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATAT < 1:45282778/68‑1 TTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATAT < 1:48962683/68‑1 CCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATATGTAG < 1:24446493/68‑1 GCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCG > 1:5024237/1‑43 CTACATATCGCCGATGACTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATATGTAGGCCGG < 1:28852556/68‑1 CTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATATGTAGGCCGG < 1:11566131/68‑1 TACATATCGACGATGATTAACCGCGCCACGCTTTCTAGCGGTTAATCATCGTCGATATGTAGGCCGGA < 1:48177904/68‑1 ATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCATCGTCGATATGTAGGCCGGATAA > 1:22992661/1‑68 GCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGA < 1:47183613/68‑1 GCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGA > 1:47028177/1‑68 GGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGAT < 1:263059/67‑1 TTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGC < 1:42304085/60‑1 TAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCG < 1:28557707/67‑1 AATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAC < 1:41427205/68‑1 TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGC > 1:23579714/1‑68 TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGC > 1:43273161/1‑68 TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGC > 1:36979567/1‑68 TCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGC > 1:34671290/1‑68 CATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCG > 1:39113686/1‑68 CATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCG < 1:32627669/68‑1 CATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCG < 1:7913657/68‑1 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:13281301/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:753641/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:5442537/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:5034179/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:10776597/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:50586976/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:13684924/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG < 1:47124683/68‑1 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:46894239/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:1550844/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG < 1:1573378/68‑1 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:17891738/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:18505150/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG < 1:35936674/68‑1 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:21297285/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG < 1:34001279/68‑1 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG < 1:21555673/68‑1 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:21885941/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:28163971/1‑68 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG < 1:27756450/68‑1 ATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:27583766/1‑68 ATCGTCGATATGTAGGCAGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > 1:722621/1‑68 CGGATGCGGCGTGAACGCCTTATCCGGCCTACATATCGACGATGATTAACCGCGCCACGCTTTATAGCGGTTAATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4225380‑4225304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggttaatcaTCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGG > CP009273/4225339‑4225405 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |