| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 859744 = | NA (NA) | 9 (0.020) | 5/92 | NT | NA | coding (647/663 nt) | fsaA | fructose‑6‑phosphate aldolase 1 |
| ? | CP009273 | 859774 = | NA (NA) | intergenic (+14/+62) | fsaA/moeB | fructose‑6‑phosphate aldolase 1/molybdopterin synthase sulfurylase | |||||
Only 100 of 221 total aligned reads displayed.
GATAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/859818‑859744‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgttctgcATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATTAC > CP009273/859774‑859839 tATAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGAC < 1:23975593/67‑1GATAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGAC < 1:47780959/68‑1GATAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGAC < 1:2133084/68‑1GATAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGAC < 1:43970602/68‑1 TAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:22366698/1‑68 TAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:29479115/1‑68 TAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT < 1:33844555/68‑1 TAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:25512344/1‑68 TAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:24521312/1‑68 TAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT < 1:36660315/68‑1 TAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:42102135/1‑68 TAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:1956065/1‑68 TAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTACCGTTAAATCGACGT > 1:23202787/1‑68 TAAGAAGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT < 1:15314995/68‑1 AAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTT < 1:50810497/68‑1 AAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:24980067/1‑67 AAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:20530759/1‑67 AAGACGCGGCACTCCGCAACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:45759228/1‑67 GACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:30678078/1‑65 GACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGT > 1:12125680/1‑65 ACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCT > 1:8964857/1‑67 ACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCT > 1:29226255/1‑67 ACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCT > 1:44810544/1‑67 ACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCT > 1:38024790/1‑67 CGCGGCACTCGGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:50573195/1‑67 CGCGGCACTCCGCCCCGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGCCGTTCTG > 1:33438016/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGC < 1:35384635/68‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:26082032/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:44519593/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:17778629/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:2977501/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:325924/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:8183880/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:34642843/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG < 1:26202444/67‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG < 1:39323456/67‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:19175967/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:25069386/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:15720594/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:14801341/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:24285792/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:17254577/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTG > 1:4076735/1‑67 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCT < 1:4360732/66‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCT < 1:9002329/66‑1 CGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCT < 1:27285487/66‑1 ACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGCATCCT < 1:33769534/67‑1 ACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGCATCCT < 1:42152100/67‑1 cgcCATCAGCAATTTATGAGGATGCAGACCGTCCGGTTAAATCGACGTTCTGCATCCTCATAAATTGC < 1:17552931/65‑1 GTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGCATCCTCATAAATTGCT < 1:13192711/68‑1 GTCATCAGCAATTTATCAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGCATCCTCATAAATTGCT < 1:37211235/68‑1 ACGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTG > 1:4499538/1‑67 ccTTCTGCATCCTCATAAATTGCTGATGACCTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:48035270/65‑1 CGTTCTGCATCCTCATAACTTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:23175061/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGC > 1:24821478/1‑68 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGC > 1:14496900/1‑68 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGC > 1:23312976/1‑68 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:21983869/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:10385950/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:43312308/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:43645552/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:18510525/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:16290748/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:46262291/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:6633022/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:13664561/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:50088910/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:50609107/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:6888513/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:40536583/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:7760686/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:31833381/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:27833264/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:37787324/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:37286499/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:8812133/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:35970809/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:35897510/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:26568861/67‑1 CGTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGGGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:48932096/67‑1 CGTTCTGCATCCTCATAAAATGCTGCTGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGG < 1:45303102/67‑1 GTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCA < 1:41111141/68‑1 GTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCA < 1:34387424/68‑1 GTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCA < 1:26439810/68‑1 GTTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCA < 1:38915476/68‑1 TTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTTTCAGGCCTGGAGGTGGCAA > 1:38297540/1‑68 TTCTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAA > 1:18625045/1‑68 CTGCATCCTCATAAATTGCTGATGACGTGGCGGCGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT < 1:23880279/68‑1 CTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT < 1:633504/68‑1 CTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT < 1:10038643/68‑1 CTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT < 1:5675713/68‑1 CTGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT > 1:47101467/1‑68 TGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGTCGCGTCTTATCAGGCCTGGAGGTGGCAATT > 1:48351295/1‑67 TGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT > 1:22529826/1‑67 TGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT > 1:38951584/1‑67 TGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT > 1:3307750/1‑67 TGCATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT > 1:28557773/1‑67 CATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT > 1:12341180/1‑65 CATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT > 1:11343613/1‑65 CATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATT > 1:28208548/1‑65 GATAAGACGCGGCACTCCGCCACGTCATCAGCAATTTATGAGGATGCAGAACGTCCGGTTAAATCGACGTTCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/859818‑859744‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgttctgcATCCTCATAAATTGCTGATGACGTGGCGGAGTGCCGCGTCTTATCAGGCCTGGAGGTGGCAATTAC > CP009273/859774‑859839 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |