| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3693271 | 277 (0.450) | 19 (0.040) | 9/94 | NT | 6.9% | intergenic (+18/+69) | bcsG/ldrD | DUF3260 family inner membrane protein associated with cellulose production/toxic polypeptide, small |
| ? | CP009273 | = 3693281 | 278 (0.540) | intergenic (+28/+59) | bcsG/ldrD | DUF3260 family inner membrane protein associated with cellulose production/toxic polypeptide, small | |||||
Only 100 of 784 total aligned reads displayed.
AACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACAC > CP009273/3693204‑3693338 | aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga > 1:27694568/1‑68 (MQ=255) aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga > 1:28789211/1‑68 (MQ=255) aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga > 1:7150072/1‑68 (MQ=255) aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga < 1:34153158/68‑1 (MQ=255) aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga > 1:18373923/1‑68 (MQ=255) aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga > 1:43305875/1‑68 (MQ=255) aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga > 1:50985764/1‑68 (MQ=255) aCCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga > 1:44957646/1‑68 (MQ=255) aCCGTACGTTCGCCTGAACGGCGGCGACAGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCaga > 1:10293034/1‑68 (MQ=255) ccGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCagag > 1:46075210/1‑68 (MQ=255) ccGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCagag < 1:39760247/68‑1 (MQ=255) ccGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCagag > 1:38362681/1‑68 (MQ=255) ccGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCagag > 1:6046948/1‑68 (MQ=255) ccGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCagag > 1:32492628/1‑68 (MQ=255) ccGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCagag > 1:28250304/1‑68 (MQ=255) cGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGt > 1:11949678/1‑68 (MQ=255) aCGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGttt > 1:1902461/1‑67 (MQ=255) gTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTcc > 1:36672581/1‑67 (MQ=255) ttCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTccc > 1:43877317/1‑67 (MQ=255) ttCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTccc > 1:12330474/1‑67 (MQ=255) ttCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTccc > 1:1775768/1‑67 (MQ=255) ttCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTccc > 1:19452566/1‑67 (MQ=255) ttCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTccc > 1:771017/1‑67 (MQ=255) tCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTccccc < 1:3784668/68‑1 (MQ=255) gCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCct > 1:34709308‑M2/1‑66 (MQ=255) gCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCct > 1:20305426‑M2/1‑66 (MQ=255) ccTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCct < 1:8080628‑M2/67‑3 (MQ=255) ccTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCct < 1:26944032‑M2/67‑3 (MQ=255) gAACGGCGGCGACTGGGTGCGTTACCCGCAGTAAGAACGAAAAAGGCCGCTGAGTTTCCCCCctgcgg > 1:11542724‑M2/1‑62 (MQ=255) gAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcgg > 1:8485788‑M2/1‑62 (MQ=255) gAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcgg > 1:30435368‑M2/1‑62 (MQ=255) gAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcgg > 1:38609944‑M2/1‑62 (MQ=255) gAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcgg > 1:29283679‑M2/1‑62 (MQ=255) gAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcgg > 1:44406877‑M2/1‑62 (MQ=255) gAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcgg > 1:36866160‑M2/1‑62 (MQ=255) gAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAACGCCGCAGAGTTTCCCCCctgcgg > 1:40971191‑M2/1‑62 (MQ=255) aaCGGCGGCGACTGGGTGCCTTACCCGCAGTAAGATCGAAAAAGGCCGCAGAGTTTCCCCCctgcgg > 1:37554592‑M2/1‑61 (MQ=255) aaCGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcgg > 1:33371632‑M2/1‑61 (MQ=255) aCGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcggc > 1:23419222‑M2/1‑60 (MQ=255) aCGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcgg < 1:21676969‑M2/66‑7 (MQ=255) aCGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcgg < 1:22460002‑M2/66‑7 (MQ=255) ggcggcGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTg > 1:24446700/1‑68 (MQ=255) ggcgACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGt > 1:15207426/1‑67 (MQ=255) aCTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCgg > 1:17252167/1‑67 (MQ=255) cTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcggcctttttcgtt > 1:41497765‑M2/1‑50 (MQ=255) cTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcggcctttttcgtt > 1:7426519‑M2/1‑50 (MQ=255) gTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGgcgaa < 1:5696969/67‑3 (MQ=255) gCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAAt > 1:10842751/1‑68 (MQ=255) tcaccCGCAGAAAGAACGAAAAAGGCCGCAGAGTTTCCCCCctgcggcctttttcgttcttactgcgg > 1:30615382‑M2/3‑41 (MQ=255) tACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGcc < 1:15895731/68‑1 (MQ=255) aCCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCATATTGCCa > 1:35126301/1‑68 (MQ=255) aCCCGCAGTAACCACGATCAAGGCCGCATAGGTTCCCCCCTGCGGCGTGGTCCGGGCGCAAATTGCCa < 1:19925389/68‑1 (MQ=255) ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAtt > 1:50210818/1‑68 (MQ=255) ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAtt > 1:42991353/1‑68 (MQ=255) ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAtt > 1:47187342/1‑68 (MQ=255) ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAtt > 1:22192719/1‑68 (MQ=255) ccGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAtt > 1:25256335/1‑68 (MQ=255) cGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAtt > 1:30037223/1‑67 (MQ=255) cGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAtt > 1:9101343/1‑67 (MQ=255) cGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCAtt > 1:25898137/1‑67 (MQ=255) tAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACgg > 1:37311761/1‑66 (MQ=255) aGAACGAAATAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGc < 1:44782931/68‑1 (MQ=255) aaCGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAg > 1:47735400/1‑65 (MQ=255) aaCGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAg > 1:33013216/1‑65 (MQ=255) aaCGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAg > 1:49311652/1‑65 (MQ=255) aaCGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAg > 1:20930484/1‑65 (MQ=255) aaCGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAg > 1:13288925/1‑65 (MQ=255) aCGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGcc < 1:518389/66‑1 (MQ=255) aCGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGcc < 1:24014963/66‑1 (MQ=255) cGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTg > 1:11329480/1‑67 (MQ=255) cGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGa < 1:42141757/68‑1 (MQ=255) aaaaGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACg < 1:1397685/67‑1 (MQ=255) aaaaGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACg < 1:26596047/67‑1 (MQ=255) aaaGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGc > 1:48954710/1‑67 (MQ=255) ggCCGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgt > 1:6436425‑M1/1‑8 (MQ=255) GGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGccgcccgc < 1:16153977‑M1/68‑1 (MQ=255) GGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGccgcccgc < 1:37169890‑M1/68‑1 (MQ=255) GCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCa < 1:22855882‑M1/68‑1 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttc > 1:5068390‑M1/1‑6 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttc > 1:9457064‑M1/1‑6 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttc > 1:45372097‑M1/1‑6 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttc > 1:441739‑M1/1‑6 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttc > 1:14376594‑M1/1‑6 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttc > 1:1673607‑M1/1‑6 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttc > 1:3229222‑M1/1‑6 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgt < 1:25728120‑M1/66‑61 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgt < 1:49700080‑M1/66‑61 (MQ=255) ccGCAGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgt < 1:12633405‑M1/66‑61 (MQ=255) CCGCGGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCAt < 1:29426901‑M1/68‑1 (MQ=255) CCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCa > 1:31295986‑M1/1‑67 (MQ=255) CCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCAt < 1:31933670‑M1/68‑1 (MQ=255) CCGCAGAGTTTCCCCACTGCGGCCTGGTCCGGGCTCAAATTGCCATTACGGCAGCCTGACGCCCGCAt < 1:36095922‑M1/68‑1 (MQ=255) aGgggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttcaggc > 1:41868720‑M1/1‑2 (MQ=255) AGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGac > 1:48317146‑M1/1‑67 (MQ=255) AGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGac > 1:10049656‑M1/1‑67 (MQ=255) AGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGac > 1:35865432‑M1/1‑67 (MQ=255) AGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGac < 1:40178027‑M1/67‑1 (MQ=255) AGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGac < 1:40412817‑M1/67‑1 (MQ=255) AGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGac > 1:48611128‑M1/1‑67 (MQ=255) ggggggaaactctgcggcctttttcgttcttactgcgggtaaggcacccagtcgccgccgttcaggcg > 1:39385843‑M1/1‑1 (MQ=255) | AACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGAGTTTCCCCCCTGCGGCCTGGTCCGGGCGCAAATTGCCATTACGGCAGCCTGACGCCCGCATGACAC > CP009273/3693204‑3693338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |