| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 248303 | 251 (0.410) | 22 (0.040) | 7/96 | NT | 7.5% | coding (919/1056 nt) | dinB | DNA polymerase IV |
| ? | CP009273 | = 248351 | 327 (0.620) | coding (967/1056 nt) | dinB | DNA polymerase IV | |||||
Only 100 of 663 total aligned reads displayed.
TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGT > CP009273/248236‑248370 | tctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcacaccgcgcccGCCGCGGc < 1:10974496‑M1/8‑1 (MQ=255)tctttccatttgcgggtcaagcaacgtcacatgcagccccaccagacgcacaccgcgcccGCCGCGGc < 1:43836195‑M1/8‑1 (MQ=255)tCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC < 1:9832216‑M1/68‑1 (MQ=255)tCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC < 1:49915181‑M1/68‑1 (MQ=255)tCGCCAGGGGGGGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGC < 1:40867282‑M1/68‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:18013552/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:1473215/67‑1 (MQ=255) cAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGa < 1:757953/67‑1 (MQ=255) gggggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATa > 1:44858115/1‑68 (MQ=255) gggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa > 1:25818780/1‑68 (MQ=255) gggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa > 1:38912653/1‑68 (MQ=255) gggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa > 1:16254740/1‑68 (MQ=255) gggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa > 1:21662783/1‑68 (MQ=255) ggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa < 1:28333352/67‑1 (MQ=255) ggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa < 1:8227690/67‑1 (MQ=255) ggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa < 1:25447203/67‑1 (MQ=255) ggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa < 1:5431093/67‑1 (MQ=255) ggTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa < 1:16501616/67‑1 (MQ=255) gTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa > 1:32949734/1‑66 (MQ=255) gTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATaaa > 1:22338394/1‑66 (MQ=255) gTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAg < 1:33641650/67‑1 (MQ=255) aaTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGa < 1:2904293/67‑1 (MQ=255) aaTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGa < 1:33223873/67‑1 (MQ=255) aaTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGAt < 1:19225929/68‑1 (MQ=255) aaTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGAt < 1:42137954/68‑1 (MQ=255) aTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGa > 1:13111262/1‑66 (MQ=255) aTTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGa > 1:8971688/1‑66 (MQ=255) ttAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCt < 1:1373006/68‑1 (MQ=255) tAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGGTGAATAAAGCTGATCTa > 1:50537917/1‑68 (MQ=255) aaaGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTaa < 1:32066265/68‑1 (MQ=255) aGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATc > 1:31258889/1‑68 (MQ=255) aGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATc > 1:20263482/1‑68 (MQ=255) aGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATc > 1:16776132/1‑68 (MQ=255) gTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATc > 1:18704955/1‑67 (MQ=255) ttttCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACcgcgc > 1:24304410/1‑68 (MQ=255) gcagccccaccagacgcacaccgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGt < 1:12727345‑M1/40‑1 (MQ=255) gCAAACCACCCAGGAGCACGTCTGGCCGCGGCgttcatcccaggttttacgcgcgggggcgagtaga > 1:29917027‑M1/1‑32 (MQ=255) gCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaa > 1:23329424/1‑67 (MQ=255) gCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaa > 1:47389951/1‑67 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaaa < 1:6592724/66‑1 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTaaaa < 1:37509767/66‑1 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAAcc < 1:6125521/68‑1 (MQ=255) aaaCCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAAcc < 1:22741981/68‑1 (MQ=255) accaccCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTg > 1:23703199/1‑68 (MQ=255) ccaccCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTgg > 1:3573085/1‑68 (MQ=255) caccCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACcgcgc < 1:41546920/56‑1 (MQ=255) accCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGa < 1:27602329/68‑1 (MQ=255) cgcacaccgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAGAACCGGGGATGa < 1:41156743‑M1/54‑1 (MQ=255) ggAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc > 1:17515852/1‑68 (MQ=255) acaccgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc < 1:36038445‑M1/56‑1 (MQ=255) aGCACGTCTGGCCGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcag > 1:11326690‑M1/1‑18 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc < 1:26951083/66‑1 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAAc < 1:4546221/66‑1 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:36703869‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:47627138‑M2/67‑2 (MQ=255) aGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACg < 1:48065684‑M2/67‑2 (MQ=255) gCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgcc < 1:15144943‑M2/68‑4 (MQ=255) accgcgcccGCCGCGGCTGAATAAAGCTGATCTAATCGCCCCCGCGCGTAAAACCTGGGATGAAcgcc < 1:1055867‑M1/59‑1 (MQ=255) aCGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgc < 1:21926502‑M2/68‑6 (MQ=255) aCGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgc < 1:30432448‑M2/68‑6 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgtcgcgg > 1:5627996‑M2/1‑61 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcgg > 1:20788649‑M2/1‑61 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcgg > 1:44468459‑M2/1‑61 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcgg > 1:43008972‑M2/1‑61 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcgg > 1:792593‑M2/1‑61 (MQ=255) gTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcg < 1:39597997‑M2/67‑7 (MQ=255) tCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggc < 1:21238475‑M2/68‑9 (MQ=255) ggCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcggg < 1:32539085/68‑1 (MQ=255) ggCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcggg < 1:36312154/68‑1 (MQ=255) ggCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcggg < 1:4583310/68‑1 (MQ=255) ggCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcggg < 1:34355239/68‑1 (MQ=255) ccGCGGCgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagac > 1:15857852‑M1/1‑7 (MQ=255) ccGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgccgccaga > 1:6900273‑M2/1‑55 (MQ=255) CCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcgggc < 1:48413667‑M1/67‑1 (MQ=255) CCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCggcgggc < 1:37203047‑M1/67‑1 (MQ=255) CGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGgcgc < 1:34752588‑M1/68‑1 (MQ=255) gcggcgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgt < 1:30753427‑M1/68‑64 (MQ=255) GCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGcgcg > 1:24013899‑M1/1‑68 (MQ=255) tGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:37835071‑M1/2‑68 (MQ=255) ggcgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgc < 1:18493231‑M1/68‑66 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAACCCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:14414244‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:5110876‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:13338551‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:10321263‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:47826054‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:46967160‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:4667461‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:26457085‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:29497679‑M1/1‑68 (MQ=255) GGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:38325132‑M1/1‑68 (MQ=255) GGCTGAAAAAAGCTGATCTATTCGCCACGGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgt > 1:49217194‑M1/1‑68 (MQ=255) GCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgtg < 1:14088970‑M1/68‑1 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:17785170‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:24886157‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:42705591‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:27428765‑M1/67‑67 (MQ=255) cgttcatcccaggttttacgcgcggtggcgattagatcagctttattcagccgcggccagacgtgct < 1:12354414‑M1/67‑67 (MQ=255) cTGAATAAAGCTGATCTACTGGCCACCGCGGGTAACACCTGGGATGAACgccgcggccagacgtgct > 1:40097728‑M2/1‑49 (MQ=255) cTGAATAAAGCTGAGCTAATCGCCACCGCGCGTAAAACCTGGGATGAACgccgcggccagacgtgct > 1:7284412‑M2/1‑49 (MQ=255) CTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGgtg > 1:11621021‑M1/1‑67 (MQ=255) | TCGCCAGGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGAGCACGTCTGGCCGCGGCTGAATAAAGCTGATCTAATCGCCACCGCGCGTAAAACCTGGGATGAACGCCGCGGCGGGCGCGGTGT > CP009273/248236‑248370 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |