| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 394482 | NA (NA) | 12 (0.020) | 7/98 | NT | NA | coding (308/309 nt) | yaiY | DUF2755 family inner membrane protein |
| ? | CP009273 | = 394503 | NA (NA) | coding (287/309 nt) | yaiY | DUF2755 family inner membrane protein | |||||
Only 100 of 799 total aligned reads displayed.
ACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAA > CP009273/394416‑394549 | aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:37192472/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:41919673/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:45801105/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:20471001/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:2368187/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:49785847/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:25614148/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:17704433/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:17029306/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:43730302/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:27454315/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:14905815/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:29578400/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:8044720/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:13256957/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:39539672/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACtt > 1:30878087/1‑67 (MQ=255)aCAGTGATCAAACAGGAATGTCAGGCAAGATAATGCGTTTCAGGCAGCATCTGACAATGTAAAACtt > 1:11603555/1‑67 (MQ=255)aCAGTGATAAAACAGGAATGTCAGGCAAGATAAGGCGTTTCAGGCATCATATGACAATCTAAAACTTa > 1:30546696/1‑68 (MQ=255) aGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTac > 1:2629896‑M1/1‑65 (MQ=255) gATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggc > 1:33938004‑M1/1‑62 (MQ=255) gATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggc > 1:23156374‑M1/1‑62 (MQ=255) gATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggc < 1:9262706‑M1/68‑7 (MQ=255) gATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggc > 1:31726543‑M1/1‑62 (MQ=255) tCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTactggcg > 1:38928971‑M1/1‑60 (MQ=255) aaCAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGa > 1:46761357/1‑68 (MQ=255) cAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATg > 1:29028285/1‑68 (MQ=255) cAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATg > 1:43369838/1‑68 (MQ=255) aaTGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGt < 1:22494074/65‑1 (MQ=255) aaTGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCG > 1:24806287‑M2/1‑67 (MQ=255) aaTGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCG > 1:16355263‑M2/1‑67 (MQ=255) aTGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCC < 1:12493820‑M2/68‑1 (MQ=255) aTGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCC < 1:37747087‑M2/68‑1 (MQ=255) tGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCA > 1:28098972‑M2/1‑68 (MQ=255) gTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTCCTGGCGGCGATGTCGCCAG > 1:11977450‑M2/1‑68 (MQ=255) gTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAG < 1:34868204‑M2/68‑1 (MQ=255) gTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAG < 1:42815323‑M2/68‑1 (MQ=255) gTCAGGCCAGATAAGGAGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAG < 1:32118103‑M2/68‑1 (MQ=255) ccggCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTg < 1:19329472/66‑1 (MQ=255) cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTg < 1:33113413/68‑1 (MQ=255) cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTg < 1:47588190/68‑1 (MQ=255) cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGT < 1:50808810‑M2/67‑1 (MQ=255) cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGT > 1:25998911‑M2/1‑67 (MQ=255) cAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGT < 1:44626020‑M2/67‑1 (MQ=255) ccAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAg > 1:6686007/1‑67 (MQ=255) ccAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAg > 1:48336063/1‑67 (MQ=255) ccAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGGCGCCAGTaagt > 1:28458394‑M2/1‑63 (MQ=255) cAGATAAGGCGTTTCAGGCCTCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGc < 1:40406765/67‑1 (MQ=255) cAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGc < 1:35932244/67‑1 (MQ=255) cAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGc < 1:9617720/67‑1 (MQ=255) cAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGc < 1:14373877/67‑1 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATa > 1:40842465/1‑67 (MQ=255) tAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAg < 1:8623437/68‑1 (MQ=255) gCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:44916766/1‑68 (MQ=255) gCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:5640264/1‑68 (MQ=255) gCGTGTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAgcgc > 1:21217918/1‑67 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTaagttttacattgt > 1:27759712‑M2/1‑53 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:31296787/1‑67 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc < 1:22067729/67‑1 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:47946843/1‑67 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:50294187/1‑67 (MQ=255) cGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGcc > 1:36655882/1‑67 (MQ=255) cAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACt < 1:9831707/68‑1 (MQ=255) cAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACt < 1:25267616/68‑1 (MQ=255) cAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACt < 1:2673081/68‑1 (MQ=255) gCCGCATCTGACAATGTAAAACTTactggcgacatcgccgccaggaagttttacattgtcagatgcg > 1:7256‑M1/1‑24 (MQ=255) gCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCa > 1:39961773/1‑68 (MQ=255) gCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGAGCCCCCACTGCa > 1:10158193/1‑68 (MQ=255) ccGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGc < 1:22818759/66‑1 (MQ=255) ccGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGc < 1:15794326/66‑1 (MQ=255) ccGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCaa > 1:2986352/1‑68 (MQ=255) ccGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCaa > 1:42335601/1‑68 (MQ=255) gCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCaaaa < 1:2699386/68‑1 (MQ=255) tCTGACAATGTAAAACTTactggcgacatcgccgccagtaagttttacattgtcagatgcggcctgaa > 1:703251‑M1/1‑18 (MQ=255) aCAATGTAAAACTTactggcgccatcgccgccagtaagttttacattgtcagatgcggcctgaaacg > 1:48940782‑M1/1‑14 (MQ=255) cAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCa > 1:15278915/1‑68 (MQ=255) aaTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCa > 1:4145764/1‑67 (MQ=255) aTGTAAAACTTactggcgacttcggcgccagtaagttttacattgtcagatgcggcctgaaacggctt > 1:16681861‑M1/1‑11 (MQ=255) aTGTAAAACTTactggcgacatcgccgccagtaagttttacattgtcagatgcggcctgaaacgcctt > 1:38279806‑M1/1‑11 (MQ=255) aTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGc < 1:19841472/68‑1 (MQ=255) aTGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGc < 1:18545135/68‑1 (MQ=255) gTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCct > 1:38009989/1‑68 (MQ=255) gTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCct < 1:46190486/68‑1 (MQ=255) tAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCct > 1:36360412/1‑67 (MQ=255) aaaaCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctac < 1:18877346/68‑1 (MQ=255) aaaaCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctac < 1:13740443/68‑1 (MQ=255) aaaaCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctac < 1:18276969/68‑1 (MQ=255) aaaCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCctact < 1:20724305/68‑1 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:24190696/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:51253071/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:34603839/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:6021064/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:41062469/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:35494721/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:49415576/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:21642810/1‑68 (MQ=255) aCTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaa > 1:10730039/1‑68 (MQ=255) aCTTACTGGAGGCGATGTCGCCAGTGCAGCAATAGCGCCACCACTGCAAAAATGAGGCTGCCTTCTaa > 1:10989141/1‑68 (MQ=255) cTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaaa > 1:7646361/1‑68 (MQ=255) ttACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTaaaa > 1:1267717/1‑68 (MQ=255) | ACAGTGATCAAACAGGAATGTCAGGCCAGATAAGGCGTTTCAGGCCGCATCTGACAATGTAAAACTTACTGGCGGCGATGTCGCCAGTGCAGCCATAGCGCCACCACTGCAAAAATGAGGCAGCCTACTAAAAA > CP009273/394416‑394549 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |