| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 834347 = | 787 (1.270) | 30 (0.060) | 11/92 | NT | 5.3% | coding (317/678 nt) | ybiX | Fe(II)‑dependent oxygenase superfamily protein |
| ? | CP009273 | 834377 = | 434 (0.850) | coding (287/678 nt) | ybiX | Fe(II)‑dependent oxygenase superfamily protein | |||||
Only 100 of 1051 total aligned reads displayed.
GCCGTCGTAGCTTTGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGATAGCGATTAA > CP009273/834280‑834413 | gccgTCGTAGCTTTGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGtttt > 1:11627766/1‑68 (MQ=255) ttgccgcgtaccctttccacgccgctgtttaatcgctatcagaacaatgaaacctatggtttccatgt > 1:45830326‑M1/66‑68 (MQ=255) cgtcgtAGCTTTGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTtgt < 1:26645592/68‑1 (MQ=255) tggcgcgtaccctttccacgccgctgtttaatcgctatcagaacaatgaaacctatggtttccatgtg > 1:29877127‑M1/65‑68 (MQ=255) gccgcgtaccctttccacgccgctgtttaatcgctatcagaacaatgaaacctatggtttccaTGTgg > 1:50583812‑M1/64‑68 (MQ=255) gccgcgtaccctttccacgccgctgtttaatcgctatcagaacaatgaaacctatggtttccaTGTgg < 1:18986388‑M1/5‑1 (MQ=255) cgcgtaccctttccacgccgctgtttaatcgctatcagaacaatgaaacctatggtttccaTGTGGAt < 1:26201281‑M1/7‑1 (MQ=255) cgcgtaccctttccacgccgctgtttaatcgctatcagaacaatgaaacctatggtttccaTGTGGAt < 1:5421552‑M1/7‑1 (MQ=255) cgcgtaccctttccacgccgctgtttaatcgctatcagaacaatgaaacctatggtttccaTGTGGAt < 1:6403669‑M1/7‑1 (MQ=255) cgcgtaccctttccacgccgctgtttaatcgctatcagaacaatgaaacctatggattccaTGTGGAt < 1:1947544‑M1/7‑1 (MQ=255) gtaccctttccacgccgctgtttaatcgctatcagaacaatgaaacctatggtttccaTGTGGATGGc > 1:29364849‑M1/59‑68 (MQ=255) gtaccctttccacgccgctgtttaatcgctatcagaacaatgaaacctatggtttccaTGTGGATGGc < 1:16281467‑M1/10‑1 (MQ=255) gtaccctttccacgccgctgtttaatcgctatcagaacaatgaaacctatggtttccaTGTGGATGGc > 1:1678439‑M1/59‑68 (MQ=255) gtaccctttccacgccgctgtttaatcgctatcagaacaatgaaacctatggtttccaTGTGGATGGc > 1:47190546‑M1/59‑68 (MQ=255) gtaccctttccacgccgctgtttaatcgctatcagaacaatgaaacctatggtttccaTGTGGATGGc > 1:34748845‑M1/59‑68 (MQ=255) gtaccctttccacgccgctgtttaatcgctatcagaacaatgaaacctatggtttccaTGTGGATGGc > 1:48047090‑M1/59‑68 (MQ=255) cTTTGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATg > 1:15382196/1‑65 (MQ=255) cTTTGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATg > 1:20110826/1‑65 (MQ=255) tttGTGGATCTCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGc < 1:32905349/66‑1 (MQ=255) tttGTGGATCGCTTAAAACCAGCGGGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGc < 1:44428998/66‑1 (MQ=255) tttGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGc < 1:37736712/66‑1 (MQ=255) tttGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGc < 1:47640870/66‑1 (MQ=255) tttGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGc < 1:27643506/66‑1 (MQ=255) tttGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGc < 1:35403066/66‑1 (MQ=255) tttGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGc < 1:46149787/66‑1 (MQ=255) tttGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGc < 1:31542205/66‑1 (MQ=255) tttGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGc < 1:25529765/66‑1 (MQ=255) tttGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGc < 1:31924478/66‑1 (MQ=255) tttGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGc < 1:17786200/66‑1 (MQ=255) tttGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGc < 1:37155781/66‑1 (MQ=255) tttGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGc < 1:21861997/66‑1 (MQ=255) tttGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGc < 1:2101752/66‑1 (MQ=255) tatgtgGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGc < 1:7912700/64‑1 (MQ=255) gtgGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGt < 1:32647765/68‑1 (MQ=255) gtgGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGt < 1:13982585/68‑1 (MQ=255) gtgGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGt < 1:12320639/68‑1 (MQ=255) ggATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGt > 1:20381957/1‑66 (MQ=255) gATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGt > 1:105002/1‑65 (MQ=255) gATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGt > 1:34266823/1‑65 (MQ=255) aTCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACt > 1:43475213/1‑67 (MQ=255) aTCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACt > 1:11359520/1‑67 (MQ=255) aTCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACt > 1:44165915/1‑67 (MQ=255) tCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTgc > 1:48466579/1‑68 (MQ=255) tCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTg < 1:7601401/67‑1 (MQ=255) gcgtAAAAACAGCGTGGCAGTAAGGTCAGTACGCATCGAGCCGTTTTGTGGATGGCTGCGTACTgcgc < 1:15827009/65‑1 (MQ=255) gCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTgcg > 1:8287795/1‑67 (MQ=255) tAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCAt < 1:28567150/68‑1 (MQ=255) aaaaaCAGCGTGGCAGAAACGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATc < 1:45377588/68‑1 (MQ=255) aaCAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCcac > 1:44886772/1‑68 (MQ=255) aCAGCGTGGCAGAAAGGTCCGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCcaca < 1:1293567/68‑1 (MQ=255) aCAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCcaca > 1:42693085/1‑68 (MQ=255) aCAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCcaca > 1:26881904/1‑68 (MQ=255) aCAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCcaca > 1:49703660/1‑68 (MQ=255) aCAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTAGATCGCTGCGTACTGCTCCATCcaca > 1:22963244/1‑68 (MQ=255) aCAGCGTGGCAGAAAGGTCAGTACGCATCAAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCcaca > 1:14829267/1‑68 (MQ=255) cGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGa < 1:49297624/68‑1 (MQ=255) atcgctatcagaacaatgaaacctatggtttccaTGTGGATGGCTGCGTACTGCGCCATCCACATGGa < 1:11011891‑M1/34‑1 (MQ=255) gTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATgg < 1:39342796/66‑1 (MQ=255) gTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGaa > 1:25821419/1‑68 (MQ=255) ggCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGaaa < 1:22383110/67‑1 (MQ=255) ggCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGaaa < 1:5942995/67‑1 (MQ=255) cAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAAcc < 1:8763872/67‑1 (MQ=255) aaGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAgg < 1:24824142/68‑1 (MQ=255) aGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGt < 1:50916923/68‑1 (MQ=255) ggTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGtt > 1:41004708/1‑68 (MQ=255) cAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTc < 1:7269292/67‑1 (MQ=255) cAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTc < 1:30440217/67‑1 (MQ=255) cAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTc < 1:43014530/67‑1 (MQ=255) cAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTc < 1:50251826/67‑1 (MQ=255) aCGCATCCAGCGGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGt < 1:40395045/68‑1 (MQ=255) aCGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCTTTGt > 1:36743650/1‑68 (MQ=255) aCGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGt < 1:46789201/68‑1 (MQ=255) aCGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGt > 1:33383216/1‑68 (MQ=255) aCGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGt > 1:14369737/1‑68 (MQ=255) aCGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGt > 1:23384985/1‑68 (MQ=255) aCGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGt > 1:27343626/1‑68 (MQ=255) cGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGtt < 1:13328001/68‑1 (MQ=255) cGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGtt < 1:32225860/68‑1 (MQ=255) cGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGtt < 1:42251009/68‑1 (MQ=255) cGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGtt < 1:9306296/68‑1 (MQ=255) cGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGt > 1:33944830/1‑67 (MQ=255) aTCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCt < 1:18387760/67‑1 (MQ=255) tCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCTCATGGAAACCAAAGGTTTCATTGTTCTGa > 1:39834862/1‑68 (MQ=255) tCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGa > 1:38597225/1‑68 (MQ=255) tCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGa < 1:9006994/68‑1 (MQ=255) tCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGa > 1:10048188/1‑68 (MQ=255) tCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGa > 1:28145936/1‑68 (MQ=255) tCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGa > 1:40077851/1‑68 (MQ=255) ggtttccaTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGATa < 1:17312305‑M1/59‑1 (MQ=255) cGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGATAg < 1:24384138/65‑1 (MQ=255) cGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGATAGCg < 1:29018987/67‑1 (MQ=255) cGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGATAGCg < 1:699445/67‑1 (MQ=255) cGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGATAGCg < 1:24034793/67‑1 (MQ=255) cGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGATAGCg < 1:31143906/67‑1 (MQ=255) cGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGATAGCg < 1:48901892/67‑1 (MQ=255) cGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGATAGCg < 1:38234909/67‑1 (MQ=255) cGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGATAGCg < 1:41410800/67‑1 (MQ=255) ccaTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGATAGCGAtt < 1:20746715‑M1/65‑1 (MQ=255) ttGTGGATGGCTGCGTACTGCGCCATCGACATGGAAACCATAGGTTTCATTGTTCTGATAGCGATTaa < 1:48723984/68‑1 (MQ=255) ttGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGATAGCGATTaa < 1:36150157/68‑1 (MQ=255) | GCCGTCGTAGCTTTGTGGATCGCTTAAAAACAGCGTGGCAGAAAGGTCAGTACGCATCCAGCCGTTTTGTGGATGGCTGCGTACTGCGCCATCCACATGGAAACCATAGGTTTCATTGTTCTGATAGCGATTAA > CP009273/834280‑834413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |