| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2191253 | 280 (0.450) | 17 (0.030) | 9/90 | NT | 6.0% | pseudogene (1301/2847 nt) | yehH | DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function |
| ? | CP009273 | = 2191263 | 311 (0.630) | pseudogene (1311/2847 nt) | yehH | DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function | |||||
Only 100 of 1027 total aligned reads displayed.
ACACTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGC > CP009273/2191186‑2191320 | acacTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGC > 1:10019653‑M1/1‑68 (MQ=255) cacTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCg < 1:11785548/68‑1 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt < 1:23787696/68‑1 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:11064906/1‑68 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:44918460/1‑68 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:24333262/1‑68 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:40780446/1‑68 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt < 1:40472956/68‑1 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:16337841/1‑68 (MQ=255) cTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGtt < 1:33115119/68‑1 (MQ=255) gCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTcc < 1:17867300/68‑1 (MQ=255) cTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTccc > 1:9740399/1‑68 (MQ=255) cTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTccc > 1:25662800/1‑68 (MQ=255) cTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTccc > 1:27611924/1‑68 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAACGCCATTGCTGCGTTCCCACAt > 1:44564254/1‑68 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:22852917/1‑68 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:29840081/1‑68 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:37158696/1‑68 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:13462817/1‑68 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:5069415/1‑68 (MQ=255) taCGGGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt < 1:30041334/68‑1 (MQ=255) aCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATg > 1:8271875‑M2/1‑67 (MQ=255) cGTGTAGCCGGGCAAAGTAAACGCTGACACGATCGGATGACGAAAGCCATTGCTGAGTTCCAACATgc < 1:32313556‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAACGCCATTGCTGCGTTCCCACATgc < 1:29719568‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:37672543‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:15884047‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:2176984‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:4588407‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:16615373‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:23054637‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:4659213‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:15347412‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:7324709‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:25196071‑M2/68‑3 (MQ=255) gtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagc > 1:15115236‑M2/1‑63 (MQ=255) gtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcag > 1:42812229‑M2/1‑63 (MQ=255) aGCCGGGCAAACTAAACGCTGTCACGATCGGGTGACGAAAGCCATTGCTGCGTTCCCACATgcagcaa > 1:11559091‑M2/1‑61 (MQ=255) gCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaat < 1:41435479‑M2/68‑9 (MQ=255) gCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaat < 1:10761494‑M2/68‑9 (MQ=255) gCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaat < 1:9063314‑M2/68‑9 (MQ=255) gCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaat < 1:4769410‑M2/68‑9 (MQ=255) ccGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg < 1:38092551‑M2/68‑10 (MQ=255) ccGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg < 1:14893447‑M2/68‑10 (MQ=255) ccGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg < 1:28707555‑M2/68‑10 (MQ=255) ccGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATAGCTGCGTTCACACAAgcagcaatg < 1:41033364‑M2/68‑10 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatgg > 1:20666266‑M2/1‑58 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg > 1:46291407‑M2/1‑58 (MQ=255) aaaCTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATggcggc < 1:33710095/67‑1 (MQ=255) aaCGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACg < 1:39964141/68‑1 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatggctttcgtcatccga > 1:5172370‑M2/1‑44 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:49551412/1‑67 (MQ=255) cTGTCACGATCGGATGACGAAAGCCATTGCTGCatgtggggacgcagcaatggctttcgtcatccga > 1:29235226‑M1/1‑33 (MQ=255) cTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:23408609/1‑66 (MQ=255) cTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:18627297/1‑66 (MQ=255) cTGTCACGATCGGATGACGAAAGCCATTGCTGCGTACCCACATGCAGCAATGGCGGCACTGACGGa > 1:34666085/1‑66 (MQ=255) gTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAAct > 1:3883193/1‑67 (MQ=255) gATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTgg > 1:30368686/1‑68 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatggctttcgtcatccgatcgtgacagc > 1:38471298‑M2/1‑34 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGc > 1:19381853/1‑68 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGc > 1:34199203/1‑68 (MQ=255) tCGGAAGACGAAAGCCATTCCTGCGTACCCACCTccagcaatggctttcgtcatccgatcgtgacagc > 1:47154021‑M2/1‑34 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaagaa > 1:50114852/1‑68 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaagaa > 1:2802616/1‑68 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:24822837/67‑1 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:43320860/67‑1 (MQ=255) aaaGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAagaaga > 1:8587570/1‑68 (MQ=255) ccATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAAc > 1:48984239/1‑68 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg > 1:7834317‑M1/1‑9 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcggttagtttgcccg > 1:6543091‑M1/1‑9 (MQ=255) cATTGCTGCGTTCCCACATgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg > 1:26327248‑M2/1‑19 (MQ=255) cATTGCTGCGTTCCCACATgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg > 1:42094058‑M2/1‑19 (MQ=255) aTTGCTGCatgtgggaacgcagcaatggctttcgtcatccgagcgtgacagcgtttagtttgcccggc < 1:577446‑M1/68‑61 (MQ=255) aTTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAg < 1:32064101/68‑1 (MQ=255) aTTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAg < 1:27037406/68‑1 (MQ=255) ttGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggct < 1:49386784‑M1/68‑62 (MQ=255) tgctgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggct > 1:45409413‑M1/1‑6 (MQ=255) gctgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctac < 1:10330118‑M1/68‑64 (MQ=255) gctgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctac > 1:21268972‑M1/1‑5 (MQ=255) gctgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctac < 1:36573870‑M1/68‑64 (MQ=255) gctgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTg > 1:20186224/1‑68 (MQ=255) gctgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTg > 1:32589630/1‑68 (MQ=255) ctgcGTTCCCACATGCAGCAATGGCGGCAGTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTg > 1:41906650/1‑67 (MQ=255) tgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacag > 1:36033810‑M1/1‑3 (MQ=255) tgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacac < 1:12142396‑M1/68‑66 (MQ=255) tgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctaca < 1:17361386‑M1/67‑65 (MQ=255) tgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagagtttagtttgcccggctacac > 1:22253306‑M1/1‑3 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTgg < 1:31007928/67‑1 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgc > 1:39362575/1‑68 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:142328‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:13835940‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:35523230‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:34049039‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:42568729‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:16106923‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:16876149‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:18244697‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:44227853‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:12777995‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttacccggctacacg < 1:3139600‑M1/68‑67 (MQ=255) gcaggtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:4829111‑M1/68‑67 (MQ=255) | ACACTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGC > CP009273/2191186‑2191320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |