| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3215213 = | 343 (0.550) | 38 (0.070) | 8/96 | NT | 10.4% | coding (389/984 nt) | ebgR | transcriptional repressor |
| ? | CP009273 | 3215274 = | 362 (0.680) | coding (450/984 nt) | ebgR | transcriptional repressor | |||||
Only 100 of 574 total aligned reads displayed.
TGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACC > CP009273/3215207‑3215338 | tactaaccgctgccgggttcgggaaagtcgataaaacagatattgtcggtcaacgcgctggcagcggt < 1:4353399‑M2/1‑1 (MQ=255) gcgcCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTAc > 1:7213310/1‑68 (MQ=255) aCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGa < 1:3922056‑M1/67‑1 (MQ=255) ccgctgccgggttcgtgaaagtcgataaaacagatattgtcggtcaacgcgctggcagcggTTACGAt < 1:848910‑M2/7‑1 (MQ=255) CCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGAt < 1:25462677‑M1/68‑1 (MQ=255) CGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGAt < 1:10924896‑M1/67‑1 (MQ=255) CGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGAt < 1:36776490‑M1/67‑1 (MQ=255) GCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGc > 1:41404756‑M1/1‑68 (MQ=255) ccgggttcgtgaaagtcgataacacagatattgtcggccaacgcgctggcagcggTTACGATGCGGt < 1:22864346‑M2/12‑1 (MQ=255) ccgggttcgtgaaagtcgataaaacagatattgtcggtcaacgcgcaggcagcggTTACGATGCGGt < 1:33942891‑M2/12‑1 (MQ=255) cgggttcgtgaaagtcgataaaacagatattgtcggtcaacgcgctggcagcggTTACGATGCGGTgg < 1:26911383‑M2/14‑1 (MQ=255) CAGCGCGTTGTCCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCggtcg > 1:49955318‑M1/1‑66 (MQ=255) CAGCGCGTTGACCTACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTgg > 1:19642482‑M1/1‑68 (MQ=255) CAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTgg > 1:40261818‑M1/1‑68 (MQ=255) gcgcGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGat > 1:15010710/1‑68 (MQ=255) gcgcGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGat > 1:34864595/1‑68 (MQ=255) gttcgtgaaagtcgataaaacagatattgtcggtcaacgcgctggcagcggTTACGATGCGGTGGat < 1:27616856‑M2/16‑1 (MQ=255) ggtcgtgaaagtcgataaaacagatattctcggtcaacgcgctgccagcggTTACGATGCGGTGGat < 1:39485747‑M2/16‑1 (MQ=255) gTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATc < 1:17159152/67‑1 (MQ=255) gTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCg > 1:11188026/1‑68 (MQ=255) tGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGAt < 1:4528010/68‑1 (MQ=255) aCAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGc > 1:14247626/1‑67 (MQ=255) aCAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGc > 1:5938655/1‑67 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa < 1:42931323/68‑1 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa < 1:48713018/68‑1 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa < 1:49353535/68‑1 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa < 1:30123016/68‑1 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa < 1:14568866/68‑1 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc < 1:28751683/68‑1 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc > 1:35412400/1‑68 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc < 1:9023508/68‑1 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc > 1:5458005/1‑68 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc > 1:16077800/1‑68 (MQ=255) cTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCa > 1:40742584/1‑68 (MQ=255) cTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCa > 1:37205123/1‑68 (MQ=255) cTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCa > 1:19085398/1‑68 (MQ=255) cTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCa > 1:5022630/1‑68 (MQ=255) cTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCa > 1:38835626/1‑68 (MQ=255) tGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAg > 1:37747109/1‑68 (MQ=255) tGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAg > 1:30595313/1‑68 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:26196045/68‑1 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:33617971/68‑1 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:39827939/68‑1 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:17874554/68‑1 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:38103938/68‑1 (MQ=255) ttttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACTCATCAGTa > 1:43960402/1‑68 (MQ=255) tttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTaa < 1:8039152/68‑1 (MQ=255) tttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTa < 1:1945591/67‑1 (MQ=255) gttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTa < 1:29584887/66‑1 (MQ=255) attATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCCCGCATCAGTaa > 1:41970721/2‑68 (MQ=255) aTCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGa < 1:47481937/68‑1 (MQ=255) cGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGaaa > 1:47239662/1‑68 (MQ=255) cGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGaaa > 1:46813256/1‑68 (MQ=255) cGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGaaa > 1:9369871/1‑68 (MQ=255) cGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGaaa > 1:19934797/1‑68 (MQ=255) gACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCTATCTGGCACGCATCAGTAAAGAAat < 1:34326260/68‑1 (MQ=255) gACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAat < 1:4220916/68‑1 (MQ=255) cTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAatga > 1:13459423/1‑66 (MQ=255) cTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAatca > 1:38478489/1‑68 (MQ=255) cGACCCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:11689751/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCTTCAGTAAAGAAATCATCGACt < 1:27275741/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:12886880/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:20833382/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:20658167/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:21549380/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:44810045/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt > 1:47962676/1‑68 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:23920225/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:48549837/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:13886427/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:12334258/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:11901840/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:30885040/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:32024067/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:10018128/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:32924929/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:36103155/68‑1 (MQ=255) cGAAACCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:24910534/68‑1 (MQ=255) gAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACtt < 1:36628096/68‑1 (MQ=255) gAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACtt < 1:2920318/68‑1 (MQ=255) cccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCta < 1:46190108/68‑1 (MQ=255) cccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCta < 1:18522500/68‑1 (MQ=255) cccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCta > 1:41686174/1‑68 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:45615145/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:10136354/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:31387936/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:6854975/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:51169908/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:2426337/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:16856700/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:48970965/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:42621174/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:2333452/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:22103307/68‑1 (MQ=255) gcagcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTTAAGAAATCATCGACTTCTATATc > 1:50710451‑M2/8‑68 (MQ=255) cagcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCa > 1:32459107‑M2/7‑68 (MQ=255) agcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCa < 1:13074104‑M2/62‑1 (MQ=255) agcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCa < 1:2653570‑M2/62‑1 (MQ=255) agcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCa < 1:28079701‑M2/62‑1 (MQ=255) agcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCa > 1:48314838‑M2/6‑67 (MQ=255) | TGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACC > CP009273/3215207‑3215338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |