| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3820789 | NA (NA) | 3 (0.010) | 3/98 | NT | NA | intergenic (+138/+31) | recG/gltS | ATP‑dependent DNA helicase/glutamate transporter |
| ? | CP009273 | = 3820811 | NA (NA) | intergenic (+160/+9) | recG/gltS | ATP‑dependent DNA helicase/glutamate transporter | |||||
Only 100 of 708 total aligned reads displayed.
ATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGACGATA > CP009273/3820744‑3820877 | aTACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGC > 1:11935261‑M2/1‑68 (MQ=255)aTACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGC > 1:25140620‑M2/1‑68 (MQ=255) tACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCt > 1:4649972/1‑68 (MQ=255) tACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCt > 1:38793950/1‑68 (MQ=255) aCGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCt > 1:11028516/1‑67 (MQ=255) aCGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCt > 1:37107517/1‑67 (MQ=255) aCGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCt > 1:15972084/1‑67 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:9644916/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:21829697/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:4833664/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:8144574/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:49318419/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:13277233/1‑68 (MQ=255) ggCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCg > 1:13989853/1‑68 (MQ=255) ggCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTCCGGCGGCACTTCTACCGCCGCTTCATCg > 1:5587372/1‑68 (MQ=255) cTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCCTCGGt > 1:21072792/1‑68 (MQ=255) cTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATc < 1:1300799/65‑1 (MQ=255) cTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCg < 1:37736650/66‑1 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:50073013/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:34122257/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:6799567/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:28454342/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:25990436/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:25530685/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCGTCATCGGTTAAcc > 1:40354923/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATATGTCTTTGTTGCGGCGGCACTTCTACCGCAGCTTCATAGGTTAAca > 1:36436330/1‑67 (MQ=255) agcgaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCg > 1:48856734/1‑67 (MQ=255) gaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCaa > 1:29789469/1‑68 (MQ=255) gaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCaa > 1:36010945/1‑68 (MQ=255) gaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCaa > 1:47072902/1‑68 (MQ=255) agcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCaaaa < 1:3087812/68‑1 (MQ=255) agcgTATCAGCCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCaaaa < 1:19203966/68‑1 (MQ=255) cgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCGTAATCGGTTAACCGGCaaaaa > 1:4257977/1‑67 (MQ=255) gTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATc > 1:46147290/1‑68 (MQ=255) aGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCa > 1:16128497/1‑67 (MQ=255) aGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCa > 1:16753928/1‑67 (MQ=255) aGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCa > 1:3118546/1‑67 (MQ=255) gCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTACCCGGCAAAAATCGGCAACa > 1:27817915/1‑68 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCTACa > 1:325607/1‑67 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa > 1:12548139/1‑67 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCATCATCGGTTAACCGGCAAAAATCGGCAAc < 1:18295443/66‑1 (MQ=255) aTTTTTATTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:47873562/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:3863517/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:17846277/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:3014620/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:2028397/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:14764707/67‑1 (MQ=255) ttGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCaa < 1:18935481/68‑1 (MQ=255) ttGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCaa < 1:22191522/68‑1 (MQ=255) gTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAAt < 1:40654187/68‑1 (MQ=255) gTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAAt > 1:33720691/1‑68 (MQ=255) tCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAAt > 1:31990619/1‑67 (MQ=255) tCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAAt > 1:45524739/1‑67 (MQ=255) tttGTTGGGGCGGCACTTCTTCCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACTTCAAATACa < 1:24094236/68‑1 (MQ=255) tttGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACa < 1:31591304/68‑1 (MQ=255) tttGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACa < 1:19810708/68‑1 (MQ=255) ttgttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACa > 1:7570587/1‑67 (MQ=255) ttgttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACa > 1:39247620/1‑67 (MQ=255) tgttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACa > 1:28610035/1‑66 (MQ=255) gttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACt < 1:34545359/68‑1 (MQ=255) ttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt > 1:14511140/1‑68 (MQ=255) ttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt > 1:42930130/1‑68 (MQ=255) ttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt > 1:41609578/1‑68 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:29268557/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:43377868/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:4380209/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:26852380/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:21369926/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:8954334/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:5097182/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:44594975/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:22741782/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:2452439/67‑1 (MQ=255) gcggcgGCACTTCTAGCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTaa < 1:8552207/68‑1 (MQ=255) aCTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAgc < 1:41957295/68‑1 (MQ=255) aCTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAgc < 1:37437713/68‑1 (MQ=255) aCTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAgc < 1:23703425/68‑1 (MQ=255) aCTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAg < 1:23271400/67‑1 (MQ=255) cTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAgcg < 1:10000513/68‑1 (MQ=255) ttCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAgcgc < 1:7024461/68‑1 (MQ=255) ttCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAgcgc < 1:26470890/68‑1 (MQ=255) tCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCa < 1:20801910/68‑1 (MQ=255) tCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCa < 1:17303812/68‑1 (MQ=255) tCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCa < 1:633074/68‑1 (MQ=255) ccgccgCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTg > 1:51143747/1‑67 (MQ=255) ccgccgCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGa < 1:38210422/68‑1 (MQ=255) ccgccgCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGa < 1:34859784/68‑1 (MQ=255) cgccgcTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGAc > 1:45174491/1‑68 (MQ=255) cgccgcTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGAc > 1:16532854/1‑68 (MQ=255) cgccgcTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGAc > 1:50442811/1‑68 (MQ=255) cgccgcTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGAc > 1:50698292/1‑68 (MQ=255) cgccgcTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGAc > 1:15349753/1‑68 (MQ=255) gccgcaacaaagacaaatgcctgatacgcttcgcttatcaagcctgcgtattgattcataatttattg > 1:27117123‑M2/1‑5 (MQ=255) cgcaagaatgacaaatgcctgatacgcttcgcttttcaaggctgcttattgattcataatttattgaa > 1:36728025‑M2/1‑3 (MQ=255) cgcaacaaagacaaatgcctgatacgcttcgcttatcaagcctgcgtattgattcataatttattgaa > 1:33087464‑M2/1‑3 (MQ=255) cgcaacaaagacaaatgcctgatacgcttcgcttatcaagcctgcgtattgattcataatttattgaa > 1:47535746‑M2/1‑3 (MQ=255) cgcaacaaagacaaatgcctgatacgcttcgcttatcaagcctgcgtattgattcataatttattga > 1:35687429‑M2/1‑3 (MQ=255) gcaacaaagacaaatgcctgatacgcttcgcttatcaagcctgcgtattgattcataatttattgaat > 1:40152490‑M2/1‑2 (MQ=255) cTTCATCGGTTAACCGGCAAATATCGGCAACATCAAATACACCTTAATTACCAGCGCATTGGCGagt > 1:29496930/1‑65 (MQ=255) cTTCATCGGTTAACCGGCAAAAATCGGCAACCTCAAATACAACTTAATTACCAGCGCATTGACGata > 1:10632931/1‑67 (MQ=255) | ATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTAATTACCAGCGCATTGACGATA > CP009273/3820744‑3820877 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |