| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4615369 | 495 (0.800) | 3 (0.010) | 3/98 | NT | 0.59% | coding (658/969 nt) | serB | 3‑phosphoserine phosphatase |
| ? | CP009273 | = 4615502 | 570 (1.050) | coding (791/969 nt) | serB | 3‑phosphoserine phosphatase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 774 total aligned reads displayed.
GACATCGTAGACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAGGGCTGGGG > CP009273/4615435‑4615569 | cATCGTAGACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTgg > 1:42850935‑M2/1‑66 (MQ=255) cATCGTAGACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTgg > 1:41435449‑M2/1‑66 (MQ=255) cATCGTAGACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTgg > 1:15999897‑M2/1‑66 (MQ=255) cATCGTAGACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTgg > 1:1460001‑M2/1‑66 (MQ=255) cATCGTAGACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTgg > 1:27680840‑M2/1‑66 (MQ=255) cGTAGACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTggcgc < 1:6277093‑M2/68‑6 (MQ=255) aGACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTggcgcag > 1:34738112‑M2/1‑60 (MQ=255) aGACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTggcgcag < 1:39172704‑M2/67‑8 (MQ=255) aGACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGa < 1:21328030/68‑1 (MQ=255) aGACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGa < 1:35621633/68‑1 (MQ=255) gACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGa > 1:13512392/1‑67 (MQ=255) gACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGa > 1:37480456/1‑67 (MQ=255) gACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGa > 1:16919667/1‑67 (MQ=255) gACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGa > 1:24037082/1‑67 (MQ=255) cgcgCAGTACAAAGCGAAATCTCTGACTCGCCTCGCGCAGGAGTATGAAATCACGCTGGCGCAGACCg > 1:44027262/1‑68 (MQ=255) cgcgCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATGCCGCTGGCGCAGACCg > 1:50908801/1‑68 (MQ=255) cgcgCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGAcc < 1:20417820/67‑1 (MQ=255) cgcgCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGAcc < 1:13009695/67‑1 (MQ=255) cgcgCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCg > 1:41648563/1‑68 (MQ=255) cgcgCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCg > 1:36968209/1‑68 (MQ=255) cgcgCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCg > 1:29386393/1‑68 (MQ=255) cgcgCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCg > 1:9526653/1‑68 (MQ=255) cgcgCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCg > 1:784479/1‑68 (MQ=255) cgcgCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCg > 1:46025979/1‑68 (MQ=255) cgcgCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCg > 1:46457206/1‑68 (MQ=255) cgcgCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCCGGCGCAGAcc < 1:50558951/67‑1 (MQ=255) aCAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGtggcgatt > 1:33839668/1‑68 (MQ=255) cAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGtggcgattg < 1:37206085/68‑1 (MQ=255) aGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGtggcgattggcg < 1:2097333/68‑1 (MQ=255) gCGACAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGtggcgattggcga > 1:41015593/1‑68 (MQ=255) gCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGtggcgattggcga > 1:15253993/1‑68 (MQ=255) gCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGtggcgattggcga > 1:8962491/1‑68 (MQ=255) gCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGtggcgattggcga > 1:11224399/1‑68 (MQ=255) gCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGtggcgattggcga > 1:12560455/1‑68 (MQ=255) gCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGtggcgattggcga > 1:2691127/1‑68 (MQ=255) gCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGtggcgattggcga > 1:26420783/1‑68 (MQ=255) gCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGtggcgattggcga > 1:26135379/1‑68 (MQ=255) gCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGtggcgattggcga > 1:48747315/1‑68 (MQ=255) gCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGtggcgattggcga > 1:22060819/1‑68 (MQ=255) gCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGtggcgattggcga > 1:42479070/1‑68 (MQ=255) gCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGtggcgattggcga > 1:43316566/1‑68 (MQ=255) aCTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGc < 1:42119464/68‑1 (MQ=255) aCTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGc < 1:10248413/68‑1 (MQ=255) aCTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGc < 1:17329533/68‑1 (MQ=255) ctctGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGcc > 1:31444086/1‑68 (MQ=255) ctctGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGcc < 1:40550537/68‑1 (MQ=255) ctctGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGcc < 1:50273296/68‑1 (MQ=255) ctctGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGcc < 1:2485846/68‑1 (MQ=255) ctctGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGcc < 1:3672679/68‑1 (MQ=255) ctctCACTCGCCTCGCGCAGGAGTATGAAAGCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGcc < 1:39611721/68‑1 (MQ=255) ctGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGcc < 1:32112086/66‑1 (MQ=255) aCTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATg > 1:32480922/1‑67 (MQ=255) ctcgcctcgcGCAGGAGTATGAAATCCCGCTGGCGCAGCCCGTGGCGATTGGCGATGGAGCCAATGa > 1:49860269/1‑67 (MQ=255) cgcctcgcGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCt < 1:36107710/68‑1 (MQ=255) cctcgcGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTg > 1:28154593/1‑67 (MQ=255) ctcgcGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGcc < 1:19493189/68‑1 (MQ=255) ctcgcGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGcc < 1:45683087/68‑1 (MQ=255) ctcgcGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGcc > 1:40776661/1‑68 (MQ=255) ctcgcGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGc < 1:1998401/67‑1 (MQ=255) cgcgCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCga < 1:18289479/68‑1 (MQ=255) cgcAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCgatg > 1:18706109/1‑68 (MQ=255) gcAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCgatga < 1:2504035/68‑1 (MQ=255) gcAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCgatga > 1:34238795/1‑68 (MQ=255) ggAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCa > 1:36460939/1‑68 (MQ=255) ggAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCa > 1:35332470/1‑68 (MQ=255) ggAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCa > 1:12017310/1‑68 (MQ=255) ggAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCa > 1:43564718/1‑68 (MQ=255) ggAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCa > 1:30896271/1‑68 (MQ=255) aGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCaaa > 1:49479377/1‑68 (MQ=255) aGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCaaa > 1:47145992/1‑68 (MQ=255) aGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCaaa > 1:15743368/1‑68 (MQ=255) aGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCaaa > 1:21685146/1‑68 (MQ=255) acgAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCg < 1:5365314/66‑1 (MQ=255) aTGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCg < 1:44584833/68‑1 (MQ=255) aTGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCg < 1:47924871/68‑1 (MQ=255) gAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGc > 1:10077282/1‑68 (MQ=255) gAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGc > 1:8586872/1‑68 (MQ=255) gAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGc > 1:6745202/1‑68 (MQ=255) gAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGc > 1:14077946/1‑68 (MQ=255) aaaTCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCa > 1:18991730/1‑68 (MQ=255) aaaTCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCa > 1:17959019/1‑68 (MQ=255) aTCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAgg > 1:2560559/1‑68 (MQ=255) aTCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAgg < 1:1059010/68‑1 (MQ=255) aTCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAgg < 1:816214/68‑1 (MQ=255) aTCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAgg < 1:24435255/68‑1 (MQ=255) aTCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAgg < 1:45102008/68‑1 (MQ=255) aTCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAgg > 1:22940652/1‑68 (MQ=255) aTCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAgg > 1:22491277/1‑68 (MQ=255) aTCCCGCTGGCGCAGACCGGGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAgg < 1:5760577/68‑1 (MQ=255) tCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAggg < 1:28359863/68‑1 (MQ=255) tCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAggg < 1:40290808/68‑1 (MQ=255) tCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAggg < 1:7084047/68‑1 (MQ=255) tCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAggg < 1:234390/68‑1 (MQ=255) cccGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAGGGc < 1:30446683/68‑1 (MQ=255) cccGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAGGGc < 1:28839842/68‑1 (MQ=255) cccGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAGGGc < 1:29980115/68‑1 (MQ=255) cccGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAGGGc < 1:4686818/68‑1 (MQ=255) cccGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAGGGc < 1:33105815/68‑1 (MQ=255) cccGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGAACAAAGCGGCAgg > 1:37917626/1‑66 (MQ=255) tGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAGGGCTgggg < 1:38585347/68‑1 (MQ=255) | GACATCGTAGACGCGCAGTACAAAGCGAAAACTCTGACTCGCCTCGCGCAGGAGTATGAAATCCCGCTGGCGCAGACCGTGGCGATTGGCGATGGAGCCAATGACCTGCCGATGATCAAAGCGGCAGGGCTGGGG > CP009273/4615435‑4615569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |