New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	360168 =	NA (NA)	91 (0.180)	14/94	NT	NA	intergenic (‑102/+493)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor
	?	CP009273	360191 =	NA (NA)					intergenic (‑125/+470)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor

GGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTC  >  CP009273/360148‑360245                                            |                                                       ggacGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTAATCAGGAGAGCGTTAACCg                                 >  1:44385520/4‑67 (MQ=1)        gcgtCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGacaaaca                          >  1:25665192/4‑67 (MQ=1)           tctcAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAg                      <  1:35474308/65‑1 (MQ=1)           tcacAACGTTCAAATCCGCTCCCGGCGGACTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAg                      <  1:48033069/65‑1 (MQ=0)                 cggtCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATaaaa                <  1:13161149/65‑1 (MQ=1)                        atacGCTCCCGGCGGATTTTTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAgg         <  1:20219090/65‑1 (MQ=0)                         tcggCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAACGGc        <  1:19236830/65‑1 (MQ=0)                               ccgggcgtATTTGTCCTACTCAGGAGAGCGTTCACCGACAAAAAACAGTTAAAACGAAAGGCCCAGTc  <  1:33803673/65‑1 (MQ=1)                               ccgggcggATTTGTCCTACTCAGGAGAGCGTTCACCGACCAACAACAGATAAAACGAAAGGCCCAGTc  <  1:41348826/65‑1 (MQ=0)                               ccgggcggATTTGTCATACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTc  <  1:45089789/65‑1 (MQ=0)                                            |                                                       GGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTC  >  CP009273/360148‑360245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.