| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 910536 = | NA (NA) | 14 (0.030) | 6/92 | NT | 6.4% | intergenic (‑223/+272) | ybjE/aqpZ | putative transporter/aquaporin Z |
| ? | CP009273 | 910538 = | 250 (0.400) | intergenic (‑225/+270) | ybjE/aqpZ | putative transporter/aquaporin Z | |||||
Only 100 of 671 total aligned reads displayed.
ACTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAG > CP009273/910471‑910605 | atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:8997833‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:31171036‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:47714010‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:39057108‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:19840262‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:19098843‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:36583464‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:6499180‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:36179839‑M2/1‑1 (MQ=255)atcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatcca < 1:17498139‑M2/1‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:49274675/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:44107647/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:21238593/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:34675267/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:44409953/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:22714913/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:10174470/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:49090503/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:46655267/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:48386210/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:32465308/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:30502989/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:5385665/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:39739264/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:18323613/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:17272264/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa < 1:8577155/68‑1 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:16268795/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:2047507/1‑68 (MQ=255)aCTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGa > 1:36856185/1‑68 (MQ=255) tcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAt > 1:15911137‑M2/67‑68 (MQ=255) tcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAt > 1:32093350‑M2/67‑68 (MQ=255) tcccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAt > 1:18734425‑M2/67‑68 (MQ=255) cccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtg > 1:38211942‑M2/66‑68 (MQ=255) cccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtg > 1:13547572‑M2/66‑68 (MQ=255) cccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtg > 1:45340904‑M2/66‑68 (MQ=255) cccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtg > 1:2835922‑M2/66‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaacccgcgccctcagcccccatccCtgt > 1:21970532‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacctccAtgt > 1:24624899‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:38746835‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:25724601‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:45725738‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:50051135‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:50654252‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:35116358‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:20724299‑M2/65‑68 (MQ=255) ccttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtg > 1:7191700‑M2/65‑67 (MQ=255) cctaacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccAtgt > 1:28156678‑M2/65‑68 (MQ=255) cACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGAtgtg > 1:17766892/1‑68 (MQ=255) ttacggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg < 1:11879993‑M2/6‑1 (MQ=255) aCCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:14847939/1‑68 (MQ=255) ccGATGTTGGTGGCGTCAAACTCGCCGAGGCGTGCCCTGAAGGCCGGGGCAGCCCACATGGATGTggg < 1:43721248/68‑1 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:41016765‑M2/61‑66 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:13162641‑M2/61‑66 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:2708610‑M2/61‑66 (MQ=255) acggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:29824106‑M2/61‑66 (MQ=255) gATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:21606771/1‑65 (MQ=255) gATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:26553646/1‑65 (MQ=255) gATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:7677531/1‑65 (MQ=255) gATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTgg > 1:28991267/1‑65 (MQ=255) cggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTgg > 1:47054195‑M2/60‑65 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:10661060‑M2/59‑67 (MQ=255) ggctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCt > 1:43449526‑M2/59‑67 (MQ=255) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGa > 1:4852481/1‑68 (MQ=39) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGa > 1:47987404/1‑68 (MQ=39) tGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGa > 1:26303365/1‑68 (MQ=39) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:949834‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:8269894‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:14500983‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:24992396‑M2/58‑67 (MQ=255) gctaccgggtcgggcgcgaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCTg > 1:42345876‑M2/58‑67 (MQ=255) tggtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAgg > 1:33538989/1‑67 (MQ=35) tggtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAgg > 1:51310569/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:11221389/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:19382613/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:41522071/1‑67 (MQ=35) gtggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgc > 1:23028238/1‑67 (MQ=35) tggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc > 1:5501194/1‑68 (MQ=35) tggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc > 1:4619041/1‑68 (MQ=35) tggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc > 1:29314617/1‑68 (MQ=35) ggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc < 1:37786569/67‑1 (MQ=35) ggCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGgcgc < 1:6046435/67‑1 (MQ=35) cGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGt < 1:5674077/67‑1 (MQ=35) ggcAAAATCGCCGAGGCGCTCCCTGACCGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtt < 1:39415350/65‑1 (MQ=11) gTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtt < 1:13864679/67‑1 (MQ=35) gggcgcgaggtaacatccctgaaaaacccgccctcagcccacatccATGTGGGCTGAGGGCGCGtttt < 1:22299402‑M2/22‑1 (MQ=255) cAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:41951409/67‑1 (MQ=35) cAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:40257211/67‑1 (MQ=35) cAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:8764043/67‑1 (MQ=35) cAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:35731861/67‑1 (MQ=35) cAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:42973043/67‑1 (MQ=35) cAAAATCGCCGAGGCGTTCCCAGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGtttt < 1:44719022/67‑1 (MQ=25) aTCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAgg > 1:32989128/1‑68 (MQ=35) tCGCCGAGGCGTTCCCTGACGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:12486496/68‑1 (MQ=18) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:23736204/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:16759257/68‑1 (MQ=33) tCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAggg < 1:33821872/68‑1 (MQ=33) gaggtaacatccctgtaaaacgcgccctcagcccacatccATGTGGGCGGAGGGCGCGTTTTACAggg < 1:24088758‑M2/28‑1 (MQ=255) cGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGa < 1:4954756/68‑1 (MQ=31) cGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGa < 1:34248545/68‑1 (MQ=31) | ACTGCACCGATGTTGGTGGCGTCAAAATCGCCGAGGCGTTCCCTGAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAG > CP009273/910471‑910605 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |