| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1314763 = | 449 (0.730) | 38 (0.070) | 15/94 | NT | 10.3% | coding (879/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | CP009273 | 1314808 = | 286 (0.550) | coding (834/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase | |||||
Only 100 of 502 total aligned reads displayed.
ACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314742‑1314874 | tgtttgctgatatcgtcggtACTGGCGGTAGAAATTTTGATACGGTTGCAGCCGGCCCCGCCAGtat < 1:46362779‑M1/47‑2 (MQ=255) ggCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg > 1:25439320/1‑67 (MQ=255) ggCCGAGTCGACAAACGCACTGGCGGTAGAAATATTTATACTTTTGCTGCCGGCACCGCCAGTACcga < 1:47158430/68‑1 (MQ=255) gCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgac > 1:39742230/1‑68 (MQ=255) gCCGCGGCGACAAAATAACTGGCGGTAGAAATATTGATACTGTTGCTTCCGTCACCGCCAGTACcgac > 1:3993799/1‑68 (MQ=255) tgctgatatcgtcggtACTGGCGGTAGAAAGTTTGATACTGTTGCTGCCGTCACCGCCAGTACcgac < 1:26479050‑M1/51‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:30575826/66‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:47723945/66‑1 (MQ=255) gctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacga < 1:45615278‑M1/53‑1 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacga < 1:35976619/68‑1 (MQ=255) ggcgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGata < 1:32867637/67‑1 (MQ=255) gcgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATc > 1:6978401/1‑68 (MQ=255) cgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATc < 1:19560555/67‑1 (MQ=255) cgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATc < 1:23111022/67‑1 (MQ=255) gACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAg < 1:8431299/68‑1 (MQ=255) atcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCa < 1:44697413‑M1/58‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGc < 1:49558065/67‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGc < 1:12025821/67‑1 (MQ=255) aaCGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCaa > 1:3925729/1‑67 (MQ=255) cggtactggcggtcacggcagcaacagtatcaatatttctaccgccagtACCGACGATATCAGCAAAc < 1:16040977‑M2/19‑1 (MQ=255) ggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACCGACGATATCAGCAAACa < 1:5889433‑M2/20‑1 (MQ=255) ggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACCGACGATATCAGCAAACa < 1:44914275‑M2/20‑1 (MQ=255) ggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACCGACGATATCAGCAAACa < 1:13747665‑M2/20‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:50411625/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:27760131/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:40456548/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:31143672/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:7597915/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:41989792/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:16745478/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:164097/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:15531531/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:14191641/68‑1 (MQ=255) gCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAg > 1:49922864/1‑68 (MQ=255) gCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAg > 1:39040531/1‑68 (MQ=255) ACTGGCGGTATAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGa > 1:25628423‑M1/1‑67 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGAt < 1:41549751‑M1/68‑1 (MQ=255) GGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATaa < 1:31415279‑M1/67‑1 (MQ=255) GGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAAt > 1:44120885‑M1/1‑68 (MQ=255) GGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAAt > 1:21756266‑M1/1‑68 (MQ=255) GCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAAt < 1:45957707‑M1/67‑1 (MQ=255) GCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAAt < 1:21646203‑M1/67‑1 (MQ=255) GCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAAt < 1:7979678‑M1/67‑1 (MQ=255) CGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATcc < 1:14500463‑M1/68‑1 (MQ=255) CGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATcc < 1:43504785‑M1/68‑1 (MQ=255) CGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATcc < 1:17453084‑M1/68‑1 (MQ=255) TAGAAATTTTGATACTGTTGATTCCGTCAACGACAGTACCGAGGATATCAGCAAACAGATAATCCgg > 1:21014938‑M1/1‑67 (MQ=255) aGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCggg < 1:11446197/67‑1 (MQ=255) aaTATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGcgcg < 1:48600162/68‑1 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCggg > 1:38487223/1‑68 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCggg > 1:549702/1‑68 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCgg > 1:11292367/1‑67 (MQ=255) tGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAAc > 1:35528120/1‑68 (MQ=255) tACTGTTGCTGCCGTCACCGCCGGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:47426787/1‑68 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATTATCCGGGCGCGGGAACGgc > 1:37307223/1‑68 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACgg < 1:27856591/67‑1 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:29091629/68‑1 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:44381009/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:45787540/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:36652675/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:24540815/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:21184612/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:1500083/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:10071283/1‑67 (MQ=255) tGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:34321456/1‑65 (MQ=255) tGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:18930577/1‑65 (MQ=255) tGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:18865944/1‑65 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:28099055/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:13516623/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:1080697/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCg > 1:33742366/1‑68 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCg > 1:21302963/1‑68 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGttt > 1:46770726/1‑68 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:9044899/67‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:20409461/67‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:18212731/67‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:40913015/67‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:3355433/67‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGACAATCCGGGCGCGGGAACGGCGCGGCGttt > 1:28633535/1‑68 (MQ=255) tatttctaccgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGttt > 1:37715704‑M2/17‑68 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:38024102/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:34672536/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:46593486/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:25080897/68‑1 (MQ=255) cGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTcc > 1:32236316/1‑68 (MQ=255) cGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTcc < 1:29401592/68‑1 (MQ=255) gTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCa < 1:4536618/68‑1 (MQ=255) cACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGt < 1:26068981/68‑1 (MQ=255) ccgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTa > 1:6546736‑M2/9‑67 (MQ=255) ccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgcgc > 1:2356830‑M2/6‑68 (MQ=255) ccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgcgc > 1:42622581‑M2/6‑68 (MQ=255) ccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgagc > 1:22849226‑M2/6‑68 (MQ=255) tACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:47270252‑M2/2‑68 (MQ=255) tACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:33187152‑M2/2‑68 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:11853956/1‑67 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt < 1:12753668/67‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:22750026/1‑67 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:51239560/1‑67 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGt < 1:23878223/66‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGt < 1:42121478/66‑1 (MQ=255) | ACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314742‑1314874 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |