| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 902734 | 182 (0.510) | 16 (0.050) | 5/98 | NT | 9.1% | coding (1005/1431 nt) | ybjT | putative NAD‑dependent oxidoreductase |
| ? | CP009273 | = 902785 | 160 (0.510) | coding (954/1431 nt) | ybjT | putative NAD‑dependent oxidoreductase | |||||
AAATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/902661‑902734‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < CP009273/902785‑902719 AAATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGG < 1:10488384/68‑1AAATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGG < 1:21482723/68‑1AAATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGG < 1:20482910/68‑1 AATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGC < 1:27365829/68‑1 AATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGC < 1:2222994/68‑1 AATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGC < 1:213467/68‑1 TATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTG < 1:25077789/68‑1 TATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTG > 1:22171476/1‑68 ATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTGG < 1:7930333/68‑1 ATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTGG < 1:19775509/68‑1 ATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTG > 1:11913691/1‑67 TTCACTACCTGCCATAAAGCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGT > 1:16939034/1‑68 ACCTGCCATAAAGCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCG > 1:16591529/1‑68 CCATAAAGCAGCAAGGCTGGCGCCCGGAGTACGGTTATTTTGCCAAACCGGCGGGGTTTACCGTTAct > 1:2966953/1‑66 CCATAAAGCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAA > 1:22917548/1‑68 CCATAAAGCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAA > 1:21650888/1‑68 CCATAAAGCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAA > 1:11814617/1‑68 CCATAAAGCAGCAAGGCTGGCGACAGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTAACGATAAA > 1:8417524/1‑68 AGCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCC > 1:7761058/1‑68 AGCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACAGTTAAAACGTCC > 1:12862652/1‑68 GCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCC > 1:8268141/1‑67 GCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCC > 1:25967118/1‑67 GCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCC > 1:17322809/1‑67 GCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCC > 1:1357868/1‑67 GCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCC > 1:22687092/1‑67 GCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCC > 1:8021861/1‑67 GCAGCAAGGCTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCC > 1:5156442/1‑67 CTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTT > 1:16594856/1‑67 CTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTT > 1:5125816/1‑67 CTGGCGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTT > 1:13902449/1‑67 CTGGCGACCGGAGTACGCTTAATTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTT > 1:695775/1‑67 CGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCT > 1:13648978/1‑66 CGACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCT > 1:19081724/1‑66 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < 1:7237299/68‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < 1:7324463/68‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < 1:12233663/68‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < 1:26378666/68‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < 1:23940542/68‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < 1:18968488/68‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < 1:16913103/68‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:922556/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:3507029/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:3468492/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:17472899/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:15398905/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:12922807/67‑1 GACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGC < 1:10952369/67‑1 AAATATTGCCAAAGAAATAACGCTCTTTACCGCCGATTTGGTTCACTACCTGCCATAAAGCAGCAAGGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/902661‑902734‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgACCGGAGTACGGTTATTTTGCCAAACAGGCGGGGTTTACCGTTAAAACGTCCGCCAGCCTTGCTGCT < CP009273/902785‑902719 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |