| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2269311 = | 271 (0.750) | 19 (0.060) | 11/96 | NT | 7.9% | coding (560/1026 nt) | yejE | microcin C transporter YejABEF, permease subunit; ABC family |
| ? | CP009273 | 2269347 = | 213 (0.690) | coding (596/1026 nt) | yejE | microcin C transporter YejABEF, permease subunit; ABC family | |||||
Only 100 of 106 total aligned reads displayed.
ACAGTAATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2269383‑2269311‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCG > CP009273/2269347‑2269412 ACAGTAATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACA > 1:10275267/1‑67ACAGTAATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACA > 1:16966390/1‑67ACAGTAATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACA > 1:15241492/1‑67ACAGTAATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACA > 1:11342211/1‑67 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTATAATAATCAAAAACAGCGTCG > 1:29478911/1‑68 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACCGCGTCG > 1:18327393/1‑68 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG > 1:3457209/1‑68 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG < 1:5203621/68‑1 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG > 1:13702784/1‑68 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG > 1:21158164/1‑68 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG > 1:23657334/1‑68 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG > 1:10760868/1‑68 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG > 1:23859554/1‑68 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGT < 1:5694562/66‑1 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGT < 1:13258572/66‑1 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCG < 1:11029282/65‑1 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:12043734/64‑1 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:6440824/64‑1 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:1731066/64‑1 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:18714164/64‑1 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:29533045/64‑1 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:5110022/64‑1 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:11543515/64‑1 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:3259896/64‑1 AATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGC < 1:8339075/64‑1 ATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGT < 1:11715023/68‑1 ATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGT < 1:6682858/68‑1 ATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG > 1:25659674/1‑67 GCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACA < 1:7253686/68‑1 CAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGC < 1:29239170/68‑1 AGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCC < 1:3810793/65‑1 CACCAGAAGTTTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCCTAA < 1:6104661/66‑1 CACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCCTAACTT < 1:12784145/68‑1 CACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCCTAACT < 1:293355/67‑1 CACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCCTAAC < 1:11409326/66‑1 CACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCCTAA < 1:4064729/65‑1 TGTACGACGCTGGAAAGTAAAATAATCAAAAACCGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGG < 1:18150637/67‑1 TGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGG < 1:20126099/67‑1 TGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGG < 1:12631985/67‑1 TGTACGACGCTGGAAAGTAAAAAAACCAAAAACAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGG < 1:3474766/67‑1 GTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCA < 1:2432771/68‑1 aACGACGCTGGAAAGTAAAATAAACAAAACCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCA < 1:28706875/66‑1 CGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATT < 1:5539917/68‑1 AAGTAAAATAATCAAAAACAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGT < 1:29218348/68‑1 aAATCAAAAACCGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGG < 1:3015948/67‑1 TAATCAAAAACAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGG < 1:86645/68‑1 CAGCGTCGTACATCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGG < 1:7870484/68‑1 CAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGG < 1:12794898/68‑1 AGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGG > 1:23808255/1‑67 AGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGG > 1:23946004/1‑67 AGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGG > 1:13368784/1‑67 AGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGG > 1:11113921/1‑67 AGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGG > 1:15691193/1‑67 GCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTC > 1:19510478/1‑68 GCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTC > 1:15108250/1‑68 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGTCTGGATGAGTCTGGTCG > 1:15357757/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGTTGGATGAGTCTGGTCG > 1:16182207/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGG < 1:11165667/68‑1 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGG < 1:14220247/68‑1 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGG < 1:17199896/68‑1 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:9164313/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:8233629/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:3860609/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:3892938/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:5365281/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:7640537/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:7178094/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:6347159/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:7162528/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:14188372/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:15639032/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:17181930/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:18209646/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:18271041/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:18335354/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:15122857/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:14356762/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:19718855/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:19792399/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:20036111/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:1371309/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:13025886/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:20920522/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:11303595/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:22916188/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:23371396/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:28976894/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:24842247/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCG > 1:26739998/1‑67 GTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGAT > 1:10019716/1‑56 TCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTTGTCGG < 1:7297882/67‑1 CGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCG > 1:20659575/1‑68 CGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCG < 1:20981564/68‑1 CGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC < 1:19120658/67‑1 CGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC < 1:19562464/67‑1 CGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC < 1:3967113/67‑1 CGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC < 1:13918514/67‑1 CGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC < 1:20541172/67‑1 CGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC < 1:1169427/67‑1 CGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGC < 1:23917225/67‑1 ACAGTAATTGCCAGCAGCCACCAGAAG‑TTAGGCTGTACGACGCTGGAAAGTAAAATAATCAAAAACAGCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2269383‑2269311‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCG > CP009273/2269347‑2269412 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |