| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4620353 | 299 (0.830) | 9 (0.030) | 3/94 | NT | 3.2% | intergenic (‑14/‑197) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble |
| ? | CP009273 | = 4620382 | 292 (0.970) | intergenic (‑43/‑168) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 181 total aligned reads displayed.
ATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4620278‑4620353‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acttcgcctTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATACCATG < CP009273/4620382‑4620316 ATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGA < 1:22777550/68‑1ATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGA < 1:20717142/68‑1 ATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACT < 1:10208310/68‑1 ACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTC > 1:25985632/1‑67 ACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTC > 1:19685094/1‑67 ACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTC > 1:26100230/1‑67 ACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTC > 1:28642176/1‑67 CGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAATCGAATTTAGCCACGTTGGACTTCGC < 1:5399280/68‑1 CGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGC < 1:14019387/68‑1 CGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGC < 1:2958952/68‑1 CGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGC < 1:6032677/68‑1 CGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGC < 1:12529512/68‑1 CGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGC < 1:12491603/68‑1 CGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGC < 1:4702849/68‑1 CGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCG < 1:10021067/67‑1 ggTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATACACGAATTGAGCCACGTTGGACTTCGCC < 1:19556014/66‑1 GTTTCGGCGTAACAACTTTTCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:6221759/68‑1 GTTTCGGCGTAACAACTTTGCCGACACGATTCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:12098583/68‑1 GTTTCGGCGTAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:19889156/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACTAATTGAGCCACGTTGGACTTCGCC < 1:21630443/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGGCACGCTGGACTTCG > 1:20226706/1‑66 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:2416494/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:25375985/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:10052987/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:2252723/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:20924919/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:5717949/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:3717192/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:18919943/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:12759219/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:13020317/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:13851791/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:947813/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:15416306/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:8770610/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:16309647/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCC < 1:12153732/68‑1 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCG > 1:3040520/1‑66 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCG > 1:17806872/1‑66 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCG > 1:2195949/1‑66 GTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCG > 1:9724772/1‑66 GTTTCGGCGGAAAAACTTTGCCGACACGATGCATGGTATAAACGAATTGATCCACGTTGGACTTCGCC < 1:21795246/68‑1 GTATAAACGAATTGAGCCACGTTGGACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCG > 1:15875970/1‑68 CGAATTGAGCCACGTTGGACTTCGCCTTTGAAAACTCATTATCACGATAAGCATAGAGGCGAAGTCCA > 1:15658401/1‑68 CGAATTGAGCCACGTTGGACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCA > 1:17664955/1‑68 CGAATTGAGCCACGTTGGACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCA > 1:29444397/1‑68 CGAATTGAGCCACGTTGGACGTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCA > 1:2099269/1‑68 ACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTT > 1:5130946/1‑68 ACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTT > 1:27188427/1‑68 ACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTT > 1:520547/1‑68 ACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTT > 1:28973779/1‑68 ACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTT > 1:11897535/1‑68 ACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTT > 1:24563159/1‑68 ACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTT > 1:23777545/1‑68 ACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTT > 1:10773903/1‑68 ACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTT > 1:1326770/1‑68 ACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTT > 1:6685675/1‑68 ACTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACG > 1:24364966/1‑53 CTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTA > 1:26943499/1‑68 CTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTA > 1:592438/1‑68 CTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTA > 1:16050221/1‑68 CTTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTA > 1:1802618/1‑68 gTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGTAGTCCAACGTGGCTCAATTCGTTTAT > 1:12933485/2‑68 TTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTAT < 1:24681083/68‑1 TTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTAT < 1:26629803/68‑1 TTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTAT < 1:25431824/68‑1 TTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTAT < 1:24867296/68‑1 TTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTAT < 1:15829719/68‑1 TTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTAT < 1:6424906/68‑1 TTCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCCCAATTCGTTTAT < 1:7013368/68‑1 TCGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATA < 1:27885532/68‑1 CGCCTTTGAAAACTCATTATCACGATAAATATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:2899650/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:905236/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:9301547/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:7663070/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:7598252/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:6956380/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:618744/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:7218209/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:7410743/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:23256089/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:13471754/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:29669592/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:28190575/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:2564508/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:21584633/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:2054543/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:13728176/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:14300189/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:18591076/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:14914152/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:16975904/68‑1 CGCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATAC < 1:15587694/68‑1 GCCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATACC < 1:29684119/68‑1 CCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATACCA > 1:19347267/1‑68 CCTTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGGTTATACCA > 1:9810387/1‑68 CTTTGAAAACTCATTATCACTATAAACATAGCGGCGAAGTCCAACGTGGCTCAATTCGTTTATACCA < 1:16790583/67‑1 TTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATACCATG < 1:18574698/68‑1 TTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATACCATG < 1:19139271/68‑1 TTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATACCAT > 1:3375131/1‑67 ATATGACGTTTCGGCGGAACAACTTTGCCGACACGATGCATGGTATAAACGAATTGAGCCACGTTGGACTTCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4620278‑4620353‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acttcgcctTTGAAAACTCATTATCACGATAAACATAGAGGCGAAGTCCAACGTGGCTCAATTCGTTTATACCATG < CP009273/4620382‑4620316 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |