| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2930783 = | NA (NA) | 8 (0.030) | 5/90 | NT | NA | intergenic (+65/‑14) | fucI/fucK | L‑fucose isomerase/L‑fuculokinase |
| ? | CP009273 | 2930811 = | NA (NA) | coding (15/1449 nt) | fucK | L‑fuculokinase | |||||
Only 100 of 732 total aligned reads displayed.
TAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGT > CP009273/2930716‑2930849 | ctgacattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaatata > 1:6315822‑M1/67‑68 (MQ=255) aTACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTa > 1:2043309/1‑67 (MQ=255) tACATTACTCCCTGATGTTATGCCAGTTCGCTCAGGCTAAAGGGCATGAACAATCAAGAGTTGTTAGc < 1:23073082/68‑1 (MQ=19) tACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAg > 1:23694261/1‑67 (MQ=255) acattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGcc < 1:10489580‑M1/5‑1 (MQ=255) acattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGcc < 1:19886184‑M1/5‑1 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCTGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:16212527/1‑68 (MQ=255) aCATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGcc > 1:1300151/1‑68 (MQ=255) cattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCg < 1:4352161‑M1/6‑1 (MQ=255) cattggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCg < 1:28164230‑M1/6‑1 (MQ=255) attggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCgg > 1:29054325‑M1/62‑68 (MQ=255) attggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCgg > 1:13958675‑M1/62‑68 (MQ=255) attggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCgg > 1:26527175‑M1/62‑68 (MQ=255) attggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCgg < 1:19113778‑M1/7‑1 (MQ=255) attggtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCgg > 1:1948196‑M1/62‑68 (MQ=255) aTTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCgg < 1:2734720/68‑1 (MQ=255) aTTACTCCCTGATGTGATGCCCGGTCGCACCGGCAACCGGGCCTGAACAAGCAAGAGTGGTTAGCCgg > 1:16967102/1‑68 (MQ=255) ttACTCCCTGATGTGATGCCCGGTCGCTCCGGCTAGCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGa < 1:6832146/68‑1 (MQ=255) ttACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGa < 1:26086968/68‑1 (MQ=255) ttACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGa < 1:8348207/68‑1 (MQ=255) aCTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa > 1:27764074/1‑68 (MQ=255) aCTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa > 1:28652751/1‑68 (MQ=255) aCTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa > 1:16859520/1‑68 (MQ=255) aCTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa > 1:16496862/1‑68 (MQ=255) aCTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATa > 1:14508756/1‑68 (MQ=255) gtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATa < 1:27087903‑M1/10‑1 (MQ=255) gtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATa < 1:10042864‑M1/10‑1 (MQ=255) gtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATa < 1:6024690‑M1/10‑1 (MQ=255) gtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATa < 1:25978873‑M1/10‑1 (MQ=255) gtcgcgccacagtcgagtaccaggataacttcttgtttcataatcgctcctgcaataTAGCCGGATa < 1:14791551‑M1/10‑1 (MQ=255) tCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa > 1:24759577/1‑67 (MQ=255) tCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATaa > 1:14235640/1‑67 (MQ=255) tCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGAAAGAGTGGTTAGCCTGATaa > 1:8906453/1‑67 (MQ=255) cccTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc < 1:18242434/68‑1 (MQ=255) cccTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc < 1:26972451/68‑1 (MQ=255) cccTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc > 1:25049929/1‑68 (MQ=255) cccTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGc < 1:9657562/68‑1 (MQ=255) cTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCaa > 1:13559352/1‑68 (MQ=255) tgatgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAAt < 1:29682690/68‑1 (MQ=255) tgatgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAAt < 1:22006613/68‑1 (MQ=255) gatgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATg > 1:17383770/1‑68 (MQ=255) atgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGt > 1:11942353/1‑68 (MQ=255) atgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGt > 1:8696419/1‑68 (MQ=255) tgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt > 1:23558161/1‑68 (MQ=255) tgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGtt > 1:13342613/1‑68 (MQ=255) tgtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGt < 1:21324298/67‑1 (MQ=255) gtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTa > 1:4772593/1‑68 (MQ=255) gtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTa > 1:11628458/1‑68 (MQ=255) gtgatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTa > 1:9833421/1‑68 (MQ=255) gtgatgCCCGGTCGCTCCGGCTACCGGGCCGGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTa < 1:15116052/68‑1 (MQ=255) gatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAt > 1:17676398/1‑67 (MQ=255) gatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAt > 1:29826542/1‑67 (MQ=255) gatgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTAt > 1:5252944/1‑67 (MQ=255) tgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg > 1:12653595/1‑68 (MQ=255) tgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg > 1:22379053/1‑68 (MQ=255) tgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg < 1:13687141/68‑1 (MQ=255) tgCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg < 1:19238255/68‑1 (MQ=255) cgagtaccaggataacttattgtttcataatcgctcctgcaataTAGCCGGATAAGCAATGTTTTCCg < 1:28487752‑M1/24‑1 (MQ=255) gCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg > 1:3620102/1‑67 (MQ=255) cccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCg > 1:5519081/1‑66 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGc < 1:22825040/67‑1 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGc < 1:3426142/67‑1 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGc < 1:10932984/67‑1 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCt > 1:10267564/1‑68 (MQ=255) ccGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCt < 1:10618926/68‑1 (MQ=255) ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtat < 1:7763476/68‑1 (MQ=255) ggTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtaa < 1:23286319/68‑2 (MQ=255) gTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCtata > 1:18444782/1‑68 (MQ=255) cgcgCCGGCTACCGTGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGTCTATAtt < 1:21502616/68‑1 (MQ=255) cGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATAtt < 1:24663663/68‑1 (MQ=255) cGCCCCGGCCCCCGGGCCTGAACATGCAAGAGTGGGTAGCCGGATAACCAATGTTATCCGGCTATAtt < 1:15599981/68‑1 (MQ=255) gCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTg < 1:21721086/68‑1 (MQ=255) cGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAgg < 1:12225100/68‑1 (MQ=255) ggCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGa < 1:6537799/68‑1 (MQ=255) gCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGa > 1:25561672/1‑67 (MQ=255) cTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGc > 1:7699025/1‑68 (MQ=255) tACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCg < 1:4463225/68‑1 (MQ=255) tACCGGGCCTGAACAAGCAAGAGTGGATAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCg < 1:8196217/68‑1 (MQ=255) ccGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt < 1:18988203/68‑1 (MQ=255) ccGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAt < 1:9119155/68‑1 (MQ=255) tgtttcataatcgctcctgcaataTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGAtt < 1:17930881‑M1/44‑1 (MQ=255) tGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGaaa < 1:5801796/68‑1 (MQ=255) tGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGaaa < 1:12343202/68‑1 (MQ=255) aCAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaa > 1:9278121/1‑68 (MQ=255) agcaagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaagaa < 1:24436301/68‑1 (MQ=255) agcaagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaagaa < 1:9518045/68‑1 (MQ=255) agcaagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaagaa < 1:29339212/68‑1 (MQ=255) agcaagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACaagaa < 1:407760/68‑1 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:717455/1‑68 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:1748043/1‑68 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:3258214/1‑68 (MQ=255) caagAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGt > 1:1868448/1‑68 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTAt < 1:5012902/66‑1 (MQ=255) gTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTAt > 1:4591520/1‑66 (MQ=255) ggTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTg < 1:13176297/68‑1 (MQ=255) aTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt < 1:20836154‑M1/67‑1 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:7443232‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:24073873‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:22697758‑M1/1‑67 (MQ=255) TAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGt > 1:26205203‑M1/1‑67 (MQ=255) | TAATACATTACTCCCTGATGTGATGCCCGGTCGCTCCGGCTACCGGGCCTGAACAAGCAAGAGTGGTTAGCCGGATAAGCAATGTTATCCGGCTATATTGCAGGAGCGATTATGAAACAAGAAGTTATCCTGGT > CP009273/2930716‑2930849 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |