| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3851553 = | 462 (1.280) | 26 (0.090) | 10/86 | NT | 8.8% | coding (212/1494 nt) | yidJ | sulfatase/phosphatase superfamily protein |
| ? | CP009273 | 3851602 = | 182 (0.660) | coding (163/1494 nt) | yidJ | sulfatase/phosphatase superfamily protein | |||||
Only 100 of 696 total aligned reads displayed.
ATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGA > CP009273/3851486‑3851620 | aTAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTcc > 1:15698631/1‑68 (MQ=255)aTAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTcc > 1:25527483/1‑68 (MQ=255) tagtctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCAc < 1:8714260‑M1/3‑1 (MQ=255) aGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCAc > 1:22507363/1‑68 (MQ=255) agtctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACg < 1:24633013‑M1/4‑1 (MQ=255) agtctggcggcggaaggtattcgctttaattccgcctacacatgttcaccggtatgtacgcctgCACg < 1:2983941‑M1/4‑1 (MQ=255) ccGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACgg > 1:12707672/1‑68 (MQ=255) tctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACgg < 1:5752439‑M1/5‑1 (MQ=255) cGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACgg < 1:18901494/67‑1 (MQ=255) cGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACgg < 1:21359594/67‑1 (MQ=255) cGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCGGGCGCGACGTTGTTGGTCCACgg < 1:29575308/67‑1 (MQ=255) ctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACggg > 1:9076625‑M1/62‑67 (MQ=255) ctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACggg > 1:9314432‑M1/62‑67 (MQ=255) ctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACggg > 1:19438741‑M1/62‑67 (MQ=255) ctggcggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACgg > 1:21531132‑M1/62‑66 (MQ=255) aTCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCgg < 1:23195124/68‑1 (MQ=255) aTCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCgg < 1:2813752/68‑1 (MQ=255) cggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACGGGCCgg > 1:28913902‑M1/58‑67 (MQ=255) cggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACGGGCCgg > 1:10217643‑M1/58‑67 (MQ=255) ggcggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACGGGCCgg < 1:3393433‑M1/10‑1 (MQ=255) cggaatgtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACggg > 1:19637483‑M1/55‑60 (MQ=255) cggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACGGGCCGGACt > 1:6295214‑M1/55‑67 (MQ=255) cggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACGGGCCGGACt > 1:16274776‑M1/55‑67 (MQ=255) cggaaggtattcgctttaattccgcctacacctgttcaccggtttgtacgcctgCACGGGCCGGACt > 1:13383387‑M1/55‑67 (MQ=255) tAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCGTGGCGCGAGGTTGTTGGTCCACGGGCCGGACTgg < 1:5618297/68‑1 (MQ=255) tAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTgg < 1:20972605/68‑1 (MQ=255) tAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTgg < 1:28605181/68‑1 (MQ=255) tAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTgg < 1:22965278/68‑1 (MQ=255) tAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTgg < 1:17066248/68‑1 (MQ=255) aaGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGtt > 1:26797792/1‑68 (MQ=255) aGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:4009176/1‑68 (MQ=255) gTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:16640437/1‑67 (MQ=255) gTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:18710902/1‑67 (MQ=255) gTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:23702764/1‑67 (MQ=255) gTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:15244922/1‑67 (MQ=255) gTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:434129/1‑67 (MQ=255) gTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:10746944/1‑67 (MQ=255) gTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:25292482/1‑67 (MQ=255) gTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:26543876/1‑67 (MQ=255) gTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:26272149/1‑67 (MQ=255) gTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTa > 1:6886460/1‑67 (MQ=255) gTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTAGTTGGTCCACGGGCCGGACTGGtga > 1:7444122/1‑65 (MQ=255) aGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAg < 1:13672200/66‑1 (MQ=255) aGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGc < 1:11536/67‑1 (MQ=255) aGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGc < 1:2397698/67‑1 (MQ=255) gcCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGt < 1:22339007/66‑1 (MQ=255) gcCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAg < 1:6556308/68‑1 (MQ=255) cccATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGAt > 1:10427273/1‑68 (MQ=255) aTAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATAcc < 1:10926603/68‑1 (MQ=255) aTAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATAcc < 1:477928/68‑1 (MQ=255) aTAGTGGAGATGTTTTTCCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATAcc < 1:28346948/68‑1 (MQ=255) aGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCgg < 1:9760522/68‑1 (MQ=255) aGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCgg < 1:27349273/68‑1 (MQ=255) aGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCgg < 1:18436642/68‑1 (MQ=255) aGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCgg < 1:11139953/68‑1 (MQ=255) gTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGt > 1:26069204/1‑68 (MQ=255) gTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGt > 1:2704689/1‑68 (MQ=255) ggAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTaa > 1:24433498/1‑68 (MQ=255) ggAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTaa < 1:5018455/68‑1 (MQ=255) ggAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTaa > 1:4609020/1‑68 (MQ=255) ggAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTaa > 1:14148870/1‑68 (MQ=255) ggAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTaa > 1:11884661/1‑68 (MQ=255) ggAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTaa > 1:21807272/1‑68 (MQ=255) agaTGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAAt > 1:14556810/1‑68 (MQ=255) agaTGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAAt > 1:22090823/1‑68 (MQ=255) agaTGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAAt > 1:24214052/1‑68 (MQ=255) tGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAg < 1:2266120/67‑1 (MQ=255) tGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAg < 1:8553102/67‑1 (MQ=255) tGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAg > 1:8284447/1‑67 (MQ=255) tGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAg < 1:23429979/67‑1 (MQ=255) tGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAg < 1:12402179/67‑1 (MQ=255) tGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAg > 1:7241504/1‑67 (MQ=255) tGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAg < 1:6046423/67‑1 (MQ=255) tGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAg < 1:14346084/67‑1 (MQ=255) tttttGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGCCTGGTTAGCGTAGATACCGGTAAATAGTcc > 1:15117515/1‑68 (MQ=255) tttGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCgg < 1:20529698/68‑1 (MQ=255) gCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGccc < 1:24973069/68‑1 (MQ=255) cTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCg < 1:9615388/67‑1 (MQ=255) cTGGCGCGACGTTGTTGGGCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGt < 1:13067388/68‑1 (MQ=255) cTGGCGCGACGTGGTTGGACCACGGGCCGGACTGGGTAGCGTAGATACCTGTAAATAGTCCGGCCCGt < 1:3736078/68‑1 (MQ=255) cgcgACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAg > 1:10003446/1‑68 (MQ=255) cgcgACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAg > 1:17262570/1‑68 (MQ=255) gcgACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAgg < 1:20693809/68‑1 (MQ=255) gcgACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAgg < 1:78285/68‑1 (MQ=255) gcgACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAgg < 1:18145671/68‑1 (MQ=255) gACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCg < 1:17648567/68‑1 (MQ=255) gACGTTGTTGGTCCACGGGCCGGACTGGTAAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCg < 1:5411479/68‑1 (MQ=255) cGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGt < 1:823464/67‑1 (MQ=255) cGTTGTGGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGt < 1:24778072/67‑1 (MQ=255) gttgttGGTCCACGGGCCGGACTGGTTAGCGTATATACCGGTAAATAGTCCGGCCCGTGCAGGCGTAc < 1:6455329/68‑1 (MQ=255) cgcctgCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACaaa < 1:16114195‑M1/61‑1 (MQ=255) tgGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAAcc < 1:121395/68‑1 (MQ=255) tgGGCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAAcc < 1:14857562/68‑1 (MQ=255) gTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCgg > 1:13933933/1‑68 (MQ=255) gTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCgg > 1:19968525/1‑68 (MQ=255) tCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGt > 1:29305347/1‑68 (MQ=255) tCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGt > 1:16948914/1‑68 (MQ=255) tCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGt > 1:20226886/1‑68 (MQ=255) CACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGa > 1:19144024‑M1/1‑68 (MQ=255) CACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGa > 1:2767209‑M1/1‑68 (MQ=255) | ATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTGCAGGCGTACAAACCGGTGA > CP009273/3851486‑3851620 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |