| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4518081 = | 341 (0.950) | 12 (0.050) | 7/80 | NT | 4.6% | coding (654/807 nt) | sgcQ | putative nucleoside triphosphatase |
| ? | CP009273 | 4518097 = | 252 (0.980) | coding (638/807 nt) | sgcQ | putative nucleoside triphosphatase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 488 total aligned reads displayed.
AGGTGGTTGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAGCGCGCTGTCGGTA > CP009273/4518014‑4518147 | aGGTGGTTGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGccc > 1:4617116/1‑68 (MQ=255)aGGTGGTTGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGccc > 1:23027115/1‑68 (MQ=255) ggtggtTGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCCCGTTTTCCAGGCAGACGCCCg > 1:17445913/1‑68 (MQ=255) ggtggtTGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCg > 1:2846003/1‑68 (MQ=255) ggtggtTGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCg > 1:7411077/1‑68 (MQ=255) ggtggtTGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCg > 1:7932216/1‑68 (MQ=255) ggtggtTGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCg > 1:18493747/1‑68 (MQ=255) ggtggtTGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCg > 1:8322413/1‑68 (MQ=255) ggtggtTGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCg > 1:14904636/1‑68 (MQ=255) ggtggtTGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCg > 1:5569228/1‑68 (MQ=255) ggtggtTGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCg > 1:2831346/1‑68 (MQ=255) ggtggtTGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCg > 1:26335130/1‑68 (MQ=255) ggtggtTGATGTCACCCCGACAGCGGCGATACGGATTTGTTCCTCCAAGTTTTCCAGGAAGACGCCCg > 1:15266029/1‑68 (MQ=255) tggtTGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCgt < 1:13168745/67‑1 (MQ=255) tggtTGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCgt < 1:7521757/67‑1 (MQ=255) ccgccgggacgcgtaccgacagcgcgctgttaaaacgggtcaaagaaacggtgcctgacaccgtcgt > 1:1652539‑M1/65‑67 (MQ=255) ccgccgggacgcgtaccgacagcgcgctgttaaaacgggtcaaagaaacggtgcctgacaccgtCgtg < 1:28974866‑M1/4‑1 (MQ=255) ccgccgggacgcgtaccgacagcgcgctgttaaaacggggcaaagaaacggtgcctgacaccgtcgt > 1:19113376‑M1/65‑67 (MQ=255) tGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTgg < 1:5977105/68‑1 (MQ=255) tGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTgg < 1:16359610/68‑1 (MQ=255) cgggacgcgtaccgacagcgcgctgttaaaacgggtcaaagaaacggtgcctgacaccgtCGTGTTgg > 1:3492274‑M1/61‑68 (MQ=255) ggTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCa < 1:2034229/68‑1 (MQ=255) tCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAac > 1:26558734/1‑68 (MQ=255) cgcgtaccgacagcgcgctgttaaaacgggtcaaagaaacggtgcctgacaccgtCGTGTTGGCCAac > 1:14301463‑M1/56‑68 (MQ=255) cgcgtaccgacagcgcgctgttaaaacgggtcaaagaaacggtgcctgacaccgtCGTGTTGGCCAac > 1:27083592‑M1/56‑68 (MQ=255) cgcgtaccgacagcgcgctgttaaaacgggtcaaagaaacggtgcctgacaccgtCGTGTTGGCCAac < 1:1069583‑M1/13‑1 (MQ=255) gcgtaccgacagcgcgctgttaaaacgggtcaaagaaacggtgcctgccaccgtCGTGTtggcccac < 1:24567013‑M1/13‑4 (MQ=255) gcgtaccgacagcgcgctgttaaaacgggtcaaagaaacggtgcctgacaccgtCGTGTTGGCCAac < 1:22574215‑M1/13‑1 (MQ=255) cacacaGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAaca < 1:29746044/68‑1 (MQ=255) cacaGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACacg < 1:9180108/68‑1 (MQ=255) acaGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACacg > 1:23843779/1‑67 (MQ=255) acaGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACacg > 1:10000384/1‑67 (MQ=255) aGCCATCGGCTATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACacgacg > 1:18734342/1‑68 (MQ=255) aGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACacgacg > 1:19638683/1‑68 (MQ=255) aGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACacgacg > 1:25378821/1‑68 (MQ=255) gCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACgg > 1:16833285/1‑68 (MQ=255) ccATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGgt < 1:6644286/68‑1 (MQ=255) cATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGgt < 1:28819821/67‑1 (MQ=255) cATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGgt < 1:16957135/67‑1 (MQ=255) cATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGgt < 1:23436536/67‑1 (MQ=255) cATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGgt < 1:25647190/67‑1 (MQ=255) cATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGgt < 1:20553660/67‑1 (MQ=255) cagcgcgctgttaaaccggggcaacgaaccggtgcctgacaccggCGTGTTGGCCAACACGACGgtgt > 1:19338730‑M1/46‑68 (MQ=255) aTCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGgtgt < 1:17632179/68‑1 (MQ=255) aTCGGCGATACTGAGTTGTTCCTCCACGTTTACCAGGCAGCCGCCCGTGTTGGCCAACACGACGgtgt < 1:8536005/68‑1 (MQ=255) ggCGATACTGAGTTGTACCCCCCCGTTTCCCAGGCAGACGCCCGTGGTGGCCAACACGACGgtgt < 1:18302181/65‑1 (MQ=255) gCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAg > 1:11769160/1‑67 (MQ=255) gCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAg > 1:1123231/1‑67 (MQ=255) gCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAg > 1:28020133/1‑67 (MQ=255) gCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAg > 1:21038984/1‑67 (MQ=255) gctgttaaaacggggcaaagaaacggggcctgacaccgtCGTGTTGGCCAACACGACGGTGTCAGGCa > 1:26747747‑M1/40‑68 (MQ=255) gATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGc > 1:16988217/1‑67 (MQ=255) tACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCAcc < 1:2926471/68‑1 (MQ=255) tACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCAcc < 1:6781311/68‑1 (MQ=255) tACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCAcc < 1:15975342/68‑1 (MQ=255) gttgttCCTCCACGTTTTCCCGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTc < 1:2149543/67‑1 (MQ=255) gttgttCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTc < 1:20685557/67‑1 (MQ=255) gttgttCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTc < 1:27394649/67‑1 (MQ=255) gttgttCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTc < 1:12805658/67‑1 (MQ=255) gttgttCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCt > 1:24299999/1‑68 (MQ=255) gttgttCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACCGTGTCAGGCACCGTTTCt > 1:32617/1‑68 (MQ=255) gttgttCCGCCACTTTTTCCTGGCTGACGCCCGTGTTGCCCAACACGACGGTGTCAGGCACCGTTTc < 1:12316304/67‑1 (MQ=255) tgttCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCttt > 1:6265107/1‑68 (MQ=255) tgttCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCttt > 1:5401442/1‑68 (MQ=255) tgttCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCtt < 1:1534989/67‑1 (MQ=255) tcctccACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGa > 1:11565798/1‑67 (MQ=255) tcctccACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGa > 1:22298646/1‑67 (MQ=255) tcctccACGTTTTCAAGGCAGACGCCGGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGAc < 1:25132071/68‑1 (MQ=255) ctccACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGAccc > 1:20239725/1‑68 (MQ=255) tccACGTTTTCCCGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCg < 1:4822866/68‑1 (MQ=255) tccACGTTTTCCAGGCCGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCg < 1:22921715/68‑1 (MQ=255) tccACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCg < 1:5847944/68‑1 (MQ=255) tccACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCg < 1:22095480/68‑1 (MQ=255) tccACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCg < 1:7091076/68‑1 (MQ=255) tccACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCg < 1:181884/68‑1 (MQ=255) tccACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCg < 1:13948480/68‑1 (MQ=255) tccACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCg < 1:12130834/68‑1 (MQ=255) tccACGTTTACCAGCCATACGCCCGTGTTGGCCAACACGACGGTGTCTTGCACCGTTTCTTTGACCCg < 1:4082498/68‑1 (MQ=255) tacACGTTTTCCAGGCAGACGCCCGTGTTGGCCAAGACGACGGTGTCAGGCACCGTTTCTTTGTCCCg < 1:1097220/66‑1 (MQ=255) cACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGtt < 1:13881756/68‑1 (MQ=255) cACGTTTTCCAGGCAGACGCCCGTGGTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGtt < 1:14548207/68‑1 (MQ=255) cACGTTTACCAGGCAGACGCCGGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGtt < 1:9756585/68‑1 (MQ=255) cGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGtttt < 1:17901121/68‑1 (MQ=255) ccAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAgc < 1:13610512/68‑1 (MQ=255) ccAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAgc > 1:15804250/1‑68 (MQ=255) ggCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAgcgc > 1:2478516/1‑67 (MQ=255) gCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAgcgc > 1:17752810/1‑66 (MQ=255) gCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAgcgc > 1:2004876/1‑66 (MQ=255) agccGCCGGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAGCGCGCt < 1:27778514/64‑1 (MQ=255) aGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAGCGCGCt < 1:5072926/67‑1 (MQ=255) cGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAGCGCGCTg < 1:10465683/65‑1 (MQ=255) cGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAGCGCGCTg < 1:1885129/65‑1 (MQ=255) cGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAGCGCGCTGt < 1:17303475/66‑1 (MQ=255) cGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAGCGCGCTGt < 1:8854427/66‑1 (MQ=255) cGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAGCGCGCTGt < 1:9553790/66‑1 (MQ=255) cGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAGCGCGCTGt < 1:445970/66‑1 (MQ=255) cGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAGCGCGCTGTc < 1:25872790/67‑1 (MQ=255) cGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAGCGCGCTGTc < 1:11979669/67‑1 (MQ=255) ccGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAGCGCGCTGTCGGTa < 1:23605740/68‑1 (MQ=255) ccGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAGCGCGCTGTCGGTa < 1:3658911/68‑1 (MQ=255) | AGGTGGTTGCGGTCACACAGCCATCGGCGATACTGAGTTGTTCCTCCACGTTTTCCAGGCAGACGCCCGTGTTGGCCAACACGACGGTGTCAGGCACCGTTTCTTTGACCCGTTTTAACAGCGCGCTGTCGGTA > CP009273/4518014‑4518147 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |