| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4583141 = | NA (NA) | 5 (0.020) | 5/90 | NT | NA | intergenic (+12/+37) | tsr/yjjL | methyl‑accepting chemotaxis protein I, serine sensor receptor/L‑galactonate transporter |
| ? | CP009273 | 4583171 = | NA (NA) | intergenic (+42/+7) | tsr/yjjL | methyl‑accepting chemotaxis protein I, serine sensor receptor/L‑galactonate transporter | |||||
Only 100 of 397 total aligned reads displayed.
TGCGCCGCGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGA > CP009273/4583075‑4583208 | gggcactggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttAt < 1:20487020‑M1/2‑1 (MQ=255) gccgcGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGc > 1:8244447/1‑67 (MQ=255) ccgcGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGccc > 1:15616169/1‑68 (MQ=255) actggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGcc > 1:11486572‑M1/63‑67 (MQ=255) ctggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCg > 1:2481716‑M1/62‑68 (MQ=255) ctggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCg > 1:1191978‑M1/62‑68 (MQ=255) tggcgtacatcttcctgttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCGAt > 1:13275084‑M1/60‑68 (MQ=255) ggcgtacatcttcctggttcgtcagccgatcaacgacccccgtaaagattaatctccttATGCCCGAt < 1:11214310‑M1/9‑1 (MQ=255) ggcgtacatcttcctggttcgtcagccgatcaacgacccacgtaaagattaatctccttATGCCCGAt < 1:1484798‑M1/9‑1 (MQ=255) aaaaTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAg < 1:10872571/68‑1 (MQ=255) aaaaTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAg < 1:4623987/68‑1 (MQ=255) aaaaTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAg < 1:28677139/68‑1 (MQ=255) aaaTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGc < 1:2346053/68‑1 (MQ=255) aaaTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGc < 1:21775260/68‑1 (MQ=255) aaaTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGc < 1:21281344/68‑1 (MQ=255) aTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaa > 1:26482333/1‑68 (MQ=255) aTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaa > 1:14003864/1‑68 (MQ=255) aTGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaa > 1:2508721/1‑68 (MQ=255) tGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCaaa < 1:29458936/68‑1 (MQ=255) gCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAAt > 1:19161598/1‑68 (MQ=255) ccGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAAt < 1:3188082/67‑1 (MQ=255) cGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGt < 1:25209080/68‑1 (MQ=255) ggCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTAt < 1:1761065/68‑1 (MQ=255) ggCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTAt < 1:13550122/68‑1 (MQ=255) gCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATc > 1:16764408/1‑68 (MQ=255) cAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCg > 1:22288159/1‑68 (MQ=255) cAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCg > 1:19226941/1‑68 (MQ=255) aTAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGc > 1:22784074/1‑68 (MQ=255) taccGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:10066994/63‑1 (MQ=255) tAGCGAGGAGAACTGTGAAACATTTTAATCGCCATGAAAATGCCCGATAACCAAAATGTTATCggg < 1:22513075/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:2888196/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:6784899/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:23227414/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:24077623/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:3107830/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:29022718/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:20161275/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:7820175/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:18149320/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:9542889/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:17104738/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:2603376/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:15792326/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:9169636/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:15133569/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:8701471/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:1467376/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:12880057/66‑1 (MQ=255) tAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCggg < 1:12395850/66‑1 (MQ=255) aGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCAt > 1:8973152/1‑68 (MQ=255) aGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCAt > 1:28281978/1‑68 (MQ=255) gaggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATa < 1:4830265/66‑1 (MQ=255) aggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAgg > 1:1744775/1‑68 (MQ=255) ggagAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGga > 1:1969898/1‑68 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:431525/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:12141210/67‑1 (MQ=255) agaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgag < 1:5974742/67‑1 (MQ=255) gaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGTTAAGCAAAATGTTATCGGGCATAAGgaga < 1:7435558/67‑1 (MQ=255) gaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgaga < 1:16493967/67‑1 (MQ=255) gaACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGgaga < 1:13034099/67‑1 (MQ=255) aCTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTa > 1:3574081/1‑68 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTaa > 1:14237103/1‑67 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:9767751/68‑1 (MQ=255) tGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAAt < 1:3389520/68‑1 (MQ=255) gggAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATc < 1:18398823/68‑1 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:27142519/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:5781446/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:21437177/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt > 1:2035711/1‑68 (MQ=255) gAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCt < 1:5057119/67‑1 (MQ=255) cccacgtaaagattaatatccatATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCtt < 1:28482904‑M1/45‑1 (MQ=255) aaCATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCttt < 1:6428350/67‑1 (MQ=255) aaCATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTa < 1:26266117/68‑1 (MQ=255) aCATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTAc > 1:24020271/1‑68 (MQ=255) tttAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTgg < 1:1011639/68‑1 (MQ=255) tttAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTgg < 1:7088036/68‑1 (MQ=255) ttAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTggg < 1:15068068/68‑1 (MQ=255) ttAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTggg < 1:5327758/68‑1 (MQ=255) ttAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTggg < 1:24283221/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:21357271/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:14559618/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:8509656/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:7163149/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:564225/68‑1 (MQ=255) tAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGt < 1:27481892/68‑1 (MQ=255) gattaatctccttATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTc < 1:22110882‑M1/55‑1 (MQ=255) aaTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTc < 1:16289463/68‑1 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:27748226/1‑68 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:18652456/1‑68 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:24582268/1‑68 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:28102420/1‑68 (MQ=255) aTCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCg > 1:6629549/1‑68 (MQ=255) cGCCATGAAAATGCCCGATAAGCAAAATGTTATCTGGCATAAGGAGATTAATCTTTACGTGGGTCGtt < 1:25714826/68‑1 (MQ=255) cGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGtt < 1:18791500/68‑1 (MQ=255) cGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGtt < 1:2691062/68‑1 (MQ=255) cGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGtt < 1:10334307/68‑1 (MQ=255) cGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGtt < 1:21718257/68‑1 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:25365834/1‑68 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:8035950/1‑68 (MQ=255) aaTGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTg > 1:10635033/1‑68 (MQ=255) | TGCGCCGCGTAAAATGGCCGTGGCAGATAGCGAGGAGAACTGGGAAACATTTTAATCGCCATGAAAATGCCCGATAAGCAAAATGTTATCGGGCATAAGGAGATTAATCTTTACGTGGGTCGTTGATCGGCTGA > CP009273/4583075‑4583208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |