| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4619007 | 381 (1.060) | 5 (0.020) | 5/84 | NT | 2.2% | coding (1333/1668 nt) | yjjK | putative transporter subunit of ABC superfamily: ATP‑binding component |
| ? | CP009273 | 4619854 = | 149 (0.550) | coding (486/1668 nt) | yjjK | putative transporter subunit of ABC superfamily: ATP‑binding component | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 625 total aligned reads displayed.
AGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTGGC > CP009273/4618940‑4619074 | agcagcaTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAG > 1:614741‑M1/1‑68 (MQ=255) agcaTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGt < 1:7836109/66‑1 (MQ=255) aTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTc < 1:20840297/65‑1 (MQ=255) aTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCa < 1:19781191/66‑1 (MQ=255) aTGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCAc < 1:2353641/67‑1 (MQ=255) tGCCGCCAACCTGCAGGAGCTTCGCCAGATGCAGACGACCGCGCTCACTACCGGAGAGTTCACCAAcg < 1:24312231/68‑1 (MQ=255) gccgccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAAcgc > 1:15273968/1‑68 (MQ=255) cgccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAAcgcg < 1:14895908/67‑1 (MQ=255) cgccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAAcgcg < 1:7284470/67‑1 (MQ=255) cgccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAAcgcg < 1:7455612/67‑1 (MQ=255) cgccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAAcgcg < 1:22035232/67‑1 (MQ=255) cgccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAAcgcg < 1:13117713/67‑1 (MQ=255) cgccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAAcgcg < 1:10654481/67‑1 (MQ=255) cgccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAAcgcg < 1:12894084/67‑1 (MQ=255) cgccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAAcgcg < 1:12290830/67‑1 (MQ=255) cgccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGt > 1:27354487/1‑68 (MQ=255) cgccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGt > 1:16847952/1‑68 (MQ=255) ccAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGgtaagcgattgtcga > 1:7104715‑M1/1‑53 (MQ=255) acccTGAAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACGACCGGAGAGTTCACCAACGCGTTTAc < 1:22597541/66‑1 (MQ=255) aaCCTGCAGCATCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTAc < 1:16287963/68‑1 (MQ=255) aaCCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTAc < 1:19985604/68‑1 (MQ=255) aaCCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTAc < 1:17088835/68‑1 (MQ=255) aaCCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTAc < 1:14115771/68‑1 (MQ=255) aaCCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTAc < 1:13999608/68‑1 (MQ=255) aaCCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTAc < 1:10009716/68‑1 (MQ=255) aaCCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTAc < 1:5087874/68‑1 (MQ=255) tGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTg < 1:9597993/68‑1 (MQ=255) gcagcaGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGa < 1:14711923/68‑1 (MQ=255) gcagcaGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGa < 1:24082390/68‑1 (MQ=255) gcagcaGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGGTTACCCTGa < 1:2798303/68‑1 (MQ=255) gcagcTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCa > 1:10967013/1‑68 (MQ=255) gcagcTTCGCCAGAAGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCa > 1:5918852/1‑68 (MQ=255) agcTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCaa > 1:19264257/1‑67 (MQ=255) agcTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCaa > 1:9427958/1‑67 (MQ=255) ttCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAAcccc < 1:9032627/68‑1 (MQ=255) ttCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAAcc < 1:29305066/66‑1 (MQ=255) ttCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAAcc < 1:3582865/66‑1 (MQ=255) ttCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAAc < 1:20277388/65‑1 (MQ=255) tCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCt < 1:29478559/68‑1 (MQ=255) tCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCt < 1:11892772/68‑1 (MQ=255) tCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCt < 1:22331655/68‑1 (MQ=255) cGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCtt < 1:26577305/68‑1 (MQ=255) cGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCtt < 1:11250261/68‑1 (MQ=255) cGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCtt < 1:8514740/68‑1 (MQ=255) tGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaag < 1:21306148/66‑1 (MQ=255) tGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaa < 1:26315855/65‑1 (MQ=255) tGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaa < 1:21454748/65‑1 (MQ=255) tGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaa < 1:17251697/65‑1 (MQ=255) tGCAGACGACCGCGCTCACCACCGCACCGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaa < 1:20461047/65‑1 (MQ=255) gacgacCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTttaaagttaaa > 1:26969187/1‑67 (MQ=255) cgacCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCg > 1:5751341/1‑68 (MQ=255) gacCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCgg < 1:2978182/68‑1 (MQ=255) acCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCgg > 1:23241451/1‑67 (MQ=255) ccGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGc < 1:27663095/67‑1 (MQ=255) ccGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGc < 1:4450828/67‑1 (MQ=255) cgcgCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCa < 1:23649568/68‑1 (MQ=255) gcTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAAc < 1:28444367/67‑1 (MQ=255) gcTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAAc < 1:4269492/67‑1 (MQ=255) gcTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAAc < 1:1543736/67‑1 (MQ=255) gcTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACg < 1:13617298/68‑1 (MQ=255) tccccaccGGAGAGTTCACCAACGCGTTTACCCTGCTCAACCCCTTTAAAGTTAAAGCGGCCAACGTa > 1:25163868/4‑68 (MQ=255) tCACCACCGGAGAGgttagggattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgct < 1:24444568‑M1/67‑54 (MQ=255) tCACCACCGGAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgct < 1:29143997‑M1/67‑54 (MQ=255) tCACCACCGGAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgct < 1:24729774‑M1/67‑54 (MQ=255) tCACCACCGGAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgct < 1:4747243‑M1/67‑54 (MQ=255) tCACCACCGGAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgct < 1:18124341‑M1/67‑54 (MQ=255) tCACCACCGGAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgct < 1:17954819‑M1/67‑54 (MQ=255) tCACCACCGGAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgct < 1:8199075‑M1/67‑54 (MQ=255) tCACCACCGGAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgct < 1:11538916‑M1/67‑54 (MQ=255) tCACCACCGGAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgct < 1:10316367‑M1/67‑54 (MQ=255) tCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTa > 1:21798101/1‑68 (MQ=255) tCACCACCGGAGAGTTCACCAACGCGTTTACCCTCATCAACCCCTTTAAAGTTAAAGCGGCCAACCTa > 1:16090917/1‑68 (MQ=255) caccacCGGAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctcc < 1:9700190‑M1/68‑56 (MQ=255) accaccGGAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctcca < 1:13767669‑M1/68‑57 (MQ=255) accaccGGAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctcca < 1:25880135‑M1/68‑57 (MQ=255) ccaccGGAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctccag < 1:28877267‑M1/68‑58 (MQ=255) ccaccGGAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctcca > 1:6640073‑M1/1‑11 (MQ=255) accGGAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctcca > 1:6397690‑M1/1‑9 (MQ=255) accGGAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctcca > 1:19490232‑M1/1‑9 (MQ=255) accGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGgcgc > 1:14575791/1‑68 (MQ=255) ccGGAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctccagctg < 1:27197470‑M1/68‑61 (MQ=255) ccGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGcgcg > 1:15726571/1‑68 (MQ=255) ggAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctccagctgta < 1:12572049‑M1/68‑63 (MQ=255) ggAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctccagctgta < 1:16608506‑M1/68‑63 (MQ=255) ggAGAGgttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctccagctgta < 1:23154138‑M1/68‑63 (MQ=255) ggAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGcgcg > 1:1896900/1‑66 (MQ=255) ggAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGc < 1:28618836/68‑1 (MQ=255) ggAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGc < 1:20645624/68‑1 (MQ=255) ggAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGc < 1:22951478/68‑1 (MQ=255) ggAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGc < 1:23853513/68‑1 (MQ=255) agaggttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctccagctgtacg > 1:10484585‑M1/1‑4 (MQ=255) agagTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCtt > 1:18564419/1‑68 (MQ=255) agagTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCtt > 1:28155880/1‑68 (MQ=255) agagTTCACCAACGCCTTTACCCAGATCAACCCCTTAAAAGTTAAAGCGGCCAACGTAGGCGCGGCta > 1:3083381/1‑67 (MQ=255) gaggttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctccagctgtacg < 1:19086138‑M1/67‑65 (MQ=255) agTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTg > 1:379677/1‑67 (MQ=255) ggttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctccagctgtacgttc > 1:21031731‑M1/1‑1 (MQ=255) ggttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctccagctgtacgttc > 1:8363995‑M1/1‑1 (MQ=255) ggttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctccagctgtacgt < 1:17616482‑M1/66‑66 (MQ=255) ggttagcgattttcgcgtcccagtccggcagacgtagcgcatccgccgcacgctccagctgtacgt < 1:25423470‑M1/66‑66 (MQ=255) | AGCAGCATGTTGCCGCCAACCTGCAGCAGCTTCGCCAGATGCAGACGACCGCGCTCACCACCGGAGAGTTCACCAACGCGTTTACCCTGATCAACCCCTTTAAAGTTAAAGCGGCCAACGTAGGCGCGGCTTGGC > CP009273/4618940‑4619074 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |