| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1314763 = | 242 (0.670) | 14 (0.050) | 7/94 | NT | 6.8% | coding (879/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | CP009273 | 1314808 = | 180 (0.600) | coding (834/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase | |||||
Only 100 of 292 total aligned reads displayed.
CAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314743‑1314874 | tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAgtagc < 1:2752571‑M1/48‑3 (MQ=255)tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAcc < 1:6754274‑M1/48‑1 (MQ=255) ttgctgatatcgtcggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACcga < 1:27093958‑M2/5‑1 (MQ=255) tgctgatatcgtcggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACcgacg < 1:8680872‑M2/7‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg > 1:3755458/1‑68 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:12331750/66‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:12527843/66‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg < 1:25957971/65‑1 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg < 1:23939588/67‑1 (MQ=255) gcgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATc > 1:8321742/1‑68 (MQ=255) cgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATc < 1:9696918/67‑1 (MQ=255) cgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATc < 1:28386488/67‑1 (MQ=255) tcgccggtactgccggtgacggcagcaacagtatcaatatttctaccgccactACCGACGATATCAGc < 1:4107920‑M2/15‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGc < 1:14180657/67‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCa < 1:7821843/68‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCa < 1:15631591/68‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCa < 1:11441565/68‑1 (MQ=255) tcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCaa < 1:11110014‑M1/62‑1 (MQ=255) tcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCaa < 1:18877770‑M1/62‑1 (MQ=255) cggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAAc < 1:13566119‑M1/64‑1 (MQ=255) aCGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAAc > 1:16528800/1‑68 (MQ=255) ggcactggcggtgacggcagcaacagtatcaatatttctaccgccagtACCGACGATATCAGCAAACa < 1:2897830‑M2/20‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGc < 1:15212881/63‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:4260594/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:2003994/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:26663938/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:13731535/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:12068956/68‑1 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCCCCGCCAGTACCGACGATATCAGCAAACAGAt < 1:24971553‑M1/68‑1 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATTAGCAAACAGa > 1:18514634‑M1/1‑67 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCATACAGAt < 1:10904214‑M1/68‑1 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAgag < 1:21814111‑M1/68‑2 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGa > 1:3213640‑M1/1‑67 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGa > 1:22068713‑M1/1‑67 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGAt < 1:25791014‑M1/68‑1 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGAt < 1:15504479‑M1/68‑1 (MQ=255) ggaggTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAAt < 1:14470943/65‑1 (MQ=255) CGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATcc < 1:18062680‑M1/68‑1 (MQ=255) CGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATcc < 1:29472196‑M1/68‑1 (MQ=255) CGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATcc < 1:23748162‑M1/68‑1 (MQ=255) aGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCggg < 1:26996546/67‑1 (MQ=255) gAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGgc > 1:19593073/1‑67 (MQ=255) gAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGgc > 1:19952109/1‑67 (MQ=255) gAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGgc > 1:7938809/1‑67 (MQ=255) acggcagcaacagtatcaatatttctaccgccagtACCGACGATATCAGCAAACAGATAATCCGGgc > 1:22332414‑M2/36‑67 (MQ=255) aaaTATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACTGATAATCCGGgcgc > 1:16757047/1‑68 (MQ=255) aaTATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGcgcg < 1:23576290/68‑1 (MQ=255) aaTATTGATACTGTTGCTGCCGGCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGgcg < 1:6831801/66‑1 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCggg > 1:7399987/1‑68 (MQ=255) atTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGCTAATCCGGGCGCGGGa < 1:21119024/68‑1 (MQ=255) tGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAAc > 1:4581417/1‑68 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTTCCGACGATAACAGCAAACAGATAATCCCGGCGCGGGAACGgc < 1:13750131/68‑1 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:10108147/1‑68 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:7256422/68‑1 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:13175357/1‑68 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGCACGgc > 1:17115744/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:22496378/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:385682/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:15824205/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:2865123/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:20192491/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:21348879/1‑67 (MQ=255) tGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:1596897/1‑65 (MQ=255) gTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCt > 1:27787184/1‑67 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:21678560/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:17054230/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCg > 1:17766764/1‑68 (MQ=255) gctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGACCGGCGCTGCGt > 1:29071225/1‑68 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGttt > 1:4844694/1‑68 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGttt > 1:14752271/1‑68 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGttt > 1:25239135/1‑68 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:1411142/67‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:16078148/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:8542510/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:5909838/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:20999988/68‑1 (MQ=255) ccGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt > 1:9354904/1‑67 (MQ=255) ccGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt > 1:10420817/1‑67 (MQ=255) cGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTcc > 1:7583758/1‑68 (MQ=255) ccgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTa > 1:6654295‑M2/9‑67 (MQ=255) cgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgc < 1:5682972‑M2/61‑1 (MQ=255) cgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgc < 1:22568933‑M2/61‑1 (MQ=255) cgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgc < 1:27423394‑M2/61‑1 (MQ=255) ccagtACCGACGATATCAGCAACCAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgcgc > 1:1505803‑M2/6‑68 (MQ=255) ccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgcgc > 1:3045174‑M2/6‑68 (MQ=255) ccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgcgc > 1:19076622‑M2/6‑68 (MQ=255) cagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGcgcg < 1:525378‑M2/64‑1 (MQ=255) agtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCgg > 1:25530715‑M2/4‑68 (MQ=255) tACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:10982196‑M2/2‑68 (MQ=255) tACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:6492338‑M2/2‑68 (MQ=255) tACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:11785455‑M2/2‑68 (MQ=255) tACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:17340086‑M2/2‑68 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCgg < 1:26384330/65‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:23000406/1‑67 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt < 1:24806856/67‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt < 1:28106459/67‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt < 1:16449838/67‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGt < 1:4347854/66‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGt < 1:24222838/66‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGt < 1:5613250/66‑1 (MQ=255) | CAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314743‑1314874 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |