New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 1871532287 (0.800)15 (0.050) 6/96 NT 6.0% intergenic (+19/+3) yeaO/yoaF DUF488 family protein/DUF333 family outer membrane lipoprotein
?CP009273 = 1871547 226 (0.730)coding (243/255 nt) yoaF DUF333 family outer membrane lipoprotein

Only 100 of 343 total aligned reads displayed.

GCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATT  >  CP009273/1871480‑1871612
                                                                   |                                                                 
gcTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCa                                                                   >  1:14976625/1‑68 (MQ=255)
gcTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCa                                                                   >  1:9104348/1‑68 (MQ=255)
gcTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCa                                                                   >  1:16767026/1‑68 (MQ=255)
gcTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCa                                                                   >  1:4858403/1‑68 (MQ=255)
gcTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCa                                                                   >  1:25915330/1‑68 (MQ=255)
  tGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAgc                                                                 >  1:14706479‑M2/1‑66 (MQ=255)
  tGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAgc                                                                 >  1:20876282‑M2/1‑66 (MQ=255)
  tGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAg                                                                  >  1:10006031‑M2/1‑66 (MQ=255)
  gggtGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAg                                                                  >  1:27000352‑M2/2‑66 (MQ=255)
   ggTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAgcc                                                                >  1:28601187‑M2/1‑65 (MQ=255)
     tGCTGGCCGACTGGCTACGTAGCTTGTCATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAgccgg                                                              <  1:1623529‑M2/68‑6 (MQ=255)
      gCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAgccgga                                                             >  1:2631270‑M2/1‑62 (MQ=255)
        tGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAgccggatg                                                           >  1:20349529‑M2/1‑60 (MQ=255)
          gCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAgccggatgt                                                          <  1:10071759‑M2/67‑10 (MQ=255)
          gCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATgg                                                          >  1:26420044/1‑67 (MQ=255)
          gCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATgg                                                          >  1:4989190/1‑67 (MQ=255)
          gCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATgg                                                          <  1:5162027/67‑1 (MQ=255)
          gCCGACTGGCTACATAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATgg                                                          >  1:29285168/1‑67 (MQ=255)
           ccGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGt                                                         <  1:4280704/67‑1 (MQ=255)
           ccGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTc                                                        >  1:9959911/1‑68 (MQ=255)
            cGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAgccggatgctgt                                                       >  1:6066731‑M2/1‑56 (MQ=255)
            cGACTGGCTACGGAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAgccggatgctgt                                                       >  1:2441626‑M2/1‑56 (MQ=255)
             gACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCAc                                                      >  1:11964189/1‑68 (MQ=255)
               cTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCAcg                                                     <  1:27755988/67‑1 (MQ=255)
               cTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCAcg                                                     <  1:1246383/67‑1 (MQ=255)
               cTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCAcg                                                     <  1:9570235/67‑1 (MQ=255)
               cTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCAcg                                                     <  1:11781936/67‑1 (MQ=255)
               cTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCAcg                                                     <  1:18453163/67‑1 (MQ=255)
               cTGCCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCAcg                                                     <  1:26154644/67‑1 (MQ=255)
                tGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCAcgcc                                                   <  1:20712687/68‑1 (MQ=255)
                  gCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCAcgccg                                                  >  1:9348985/1‑67 (MQ=255)
                  gCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCAcgccg                                                  >  1:8256231/1‑67 (MQ=255)
                    tACGTAGCTTGTGATTTTATTACAGCATCCGGCGGTTATTTTTCACCAgccggatgctgtactaaaat                                               >  1:7390708‑M2/1‑48 (MQ=255)
                    tACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACgccgcc                                                <  1:21614277/67‑1 (MQ=255)
                    tACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACgccgcc                                                <  1:4032853/67‑1 (MQ=255)
                    tACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACgccgcc                                                <  1:22336103/67‑1 (MQ=255)
                    tACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCca                                               <  1:4405504/68‑1 (MQ=255)
                     aCGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCcac                                              <  1:19141738/68‑1 (MQ=255)
                     aCGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCcac                                              <  1:23820147/68‑1 (MQ=255)
                       gTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACaa                                            >  1:24916278/1‑68 (MQ=255)
                       gTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACaa                                            <  1:18164669/68‑1 (MQ=255)
                        tAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAAt                                           >  1:15523867/1‑68 (MQ=255)
                        tAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAAt                                           >  1:458921/1‑68 (MQ=255)
                        tAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAAt                                           >  1:22402469/1‑68 (MQ=255)
                        tAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAAt                                           >  1:7904401/1‑68 (MQ=255)
                         cgCTTGTGATTTTAGTACAGCATCCGGCGGGTATTTTTCACCAGCCGGATGGTCACGCCGCCACAAt                                           <  1:25617100/66‑1 (MQ=255)
                         aGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAAt                                           >  1:712085/1‑67 (MQ=255)
                         aGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAAt                                           >  1:17801052/1‑67 (MQ=255)
                         aGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAAt                                           >  1:3175470/1‑67 (MQ=255)
                         aGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAAt                                           <  1:16977406/67‑1 (MQ=255)
                         aGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATg                                          <  1:21762137/68‑1 (MQ=255)
                            ttGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAgccggatgctgtactaaaatcacaagc                                        >  1:2305066‑M2/1‑40 (MQ=255)
                            ttGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGc                                         <  1:13205269/66‑1 (MQ=255)
                            ttGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGc                                         <  1:29467615/66‑1 (MQ=255)
                             tgtgATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAgccggatgctgtactaaaatcacaagcta                                      >  1:569228‑M2/1‑39 (MQ=255)
                                gATTTTAGTCCAGCATCCGGCGGTTATTTTTCAACAGCCGGATGGTCACGCCGCCACAATGCCCAtt                                    <  1:12784233/67‑1 (MQ=255)
                                gATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCAtt                                    <  1:21207342/67‑1 (MQ=255)
                                 aTTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATtca                                  >  1:16479280/1‑68 (MQ=255)
                                 aTTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATtca                                  >  1:11657914/1‑68 (MQ=255)
                                 aTTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATtca                                  >  1:19721214/1‑68 (MQ=255)
                                  ttttAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATtcat                                 <  1:15677157/68‑1 (MQ=255)
                                  ttttAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATtca                                  <  1:10551300/67‑1 (MQ=255)
                                  ttttAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATtca                                  >  1:15845801/1‑67 (MQ=255)
                                  ttttAGTACAGCATCCGGCGGTTATTTTTCACCAGCCCGATGGTCACGCCGCCACAATGCCCATtca                                  <  1:21499365/67‑1 (MQ=255)
                                    ttAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATtcatca                               >  1:8699915/1‑68 (MQ=255)
                                         aCAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATc                            <  1:4089463/66‑1 (MQ=255)
                                         aCAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGt                          >  1:10402979/1‑68 (MQ=255)
                                         aCAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGt                          >  1:14333650/1‑68 (MQ=255)
                                         aCAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGt                          >  1:19815475/1‑68 (MQ=255)
                                         aCAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGt                          >  1:10621435/1‑68 (MQ=255)
                                         aCAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGt                          >  1:221151/1‑68 (MQ=255)
                                         aCAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGt                          >  1:3526640/1‑68 (MQ=255)
                                         aCAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGt                          >  1:28295959/1‑68 (MQ=255)
                                         aCAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGt                          >  1:29819856/1‑68 (MQ=255)
                                           aGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGtt                         >  1:7630338/1‑67 (MQ=255)
                                              aTCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGtt                         <  1:11419583/64‑1 (MQ=255)
                                              aTCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGtt                         <  1:5375797/64‑1 (MQ=255)
                                              aTCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCa                      >  1:6652023/1‑67 (MQ=255)
                                              aTCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCa                      >  1:9230935/1‑67 (MQ=255)
                                              aTCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCa                      >  1:6493672/1‑67 (MQ=255)
                                              aTCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCa                      >  1:21340432/1‑67 (MQ=255)
                                              aTCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCa                      >  1:13114638/1‑67 (MQ=255)
                                                 cggcggTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGc                  <  1:5590115/68‑1 (MQ=255)
                                                 cggcggTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGc                  <  1:11329852/68‑1 (MQ=255)
                                                 cggcggTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGc                  <  1:13440831/68‑1 (MQ=255)
                                                 cggcggTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGc                  <  1:27390347/68‑1 (MQ=255)
                                                   gcggTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGccc                >  1:25421085/1‑68 (MQ=255)
                                                   gcggTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGccc                >  1:26866566/1‑68 (MQ=255)
                                                   gcggTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGccc                >  1:18553474/1‑68 (MQ=255)
                                                       ttATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGt             <  1:14177801/67‑1 (MQ=255)
                                                       ttATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGt             <  1:7773135/67‑1 (MQ=255)
                                                        tATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTa            <  1:24637499/67‑1 (MQ=255)
                                                         aTTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAAt          <  1:24272372/68‑1 (MQ=255)
                                                           ttttCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAAttt        <  1:27840258/68‑1 (MQ=255)
                                                           ttttCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAAttt        <  1:6877747/68‑1 (MQ=255)
                                                            tttCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAAttt        >  1:23494358/1‑67 (MQ=255)
                                                               cACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCaa    <  1:9028766/68‑1 (MQ=255)
                                                                aCCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAAt   >  1:17163584/1‑68 (MQ=255)
                                                                 ccAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAAtt  >  1:19487063/1‑68 (MQ=255)
                                                                 ccAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAAtt  <  1:596888/68‑1 (MQ=255)
                                                                   |                                                                 
GCTGGTGCTGGCCGACTGGCTACGTAGCTTGTGATTTTAGTACAGCATCCGGCGGTTATTTTTCACCAGCCGGATGGTCACGCCGCCACAATGCCCATTCATCAATCGTTTCACCGCCCGGTAATTTGCAATT  >  CP009273/1871480‑1871612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.