| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3215213 = | 216 (0.600) | 16 (0.050) | 8/96 | NT | 7.7% | coding (389/984 nt) | ebgR | transcriptional repressor |
| ? | CP009273 | 3215274 = | 199 (0.640) | coding (450/984 nt) | ebgR | transcriptional repressor | |||||
Only 100 of 344 total aligned reads displayed.
TGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACC > CP009273/3215207‑3215338 | tcgtaaccgctgccgggttcgtgaaagtcgataaaacagatattgtcggtcaacgcgctggcagcggt < 1:2940664‑M2/1‑1 (MQ=255)tcgtaaccgctgccgggttcgtgaaagtcgataaaacagatattgtcggtcaacgcgctggcagcggt < 1:4613621‑M2/1‑1 (MQ=255) gcgcCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTAc > 1:10359056/1‑68 (MQ=255) gcgcCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTAc > 1:15475008/1‑68 (MQ=255) cgccgcTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACg > 1:18740047/1‑68 (MQ=255) aaccgccgccgggttcgtgaaagtcgataaaacagatattgtcggtcaacgcgctggcagcggTTAc < 1:21355307‑M2/4‑1 (MQ=255) aCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATGGACTTTCACGAACCCGGCAGGGGTTTCGa < 1:27360066‑M1/67‑1 (MQ=255) aCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGa < 1:6489789‑M1/67‑1 (MQ=255) GCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGc > 1:7524188‑M1/1‑68 (MQ=255) GCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGc > 1:10007854‑M1/1‑68 (MQ=255) GCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGc > 1:13954631‑M1/1‑68 (MQ=255) tgccgggatcaacaaagtcgataaaacagatattggcggtcaacgcgcgggcagcggTTACGATGCgg < 1:22804784‑M2/11‑1 (MQ=255) TGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCgg > 1:29706982‑M1/1‑68 (MQ=255) gccgggttcgtgaaagtcgataaaacagatatagccggtcaacgcgcgggcagcggTTACGATGCGGt < 1:2440297‑M2/12‑1 (MQ=255) cgggttcgtgaaagtcgataaaacagatattgtcggtcaccgcgcgggcagcggTTACGATGCGGTgg < 1:8033800‑M2/14‑1 (MQ=255) CAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTgg < 1:2396971‑M1/68‑1 (MQ=255) CAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTgg > 1:24917670‑M1/1‑68 (MQ=255) CAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTgg > 1:29245187‑M1/1‑68 (MQ=255) CAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTgg > 1:18411775‑M1/1‑68 (MQ=255) CAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTgg > 1:844306‑M1/1‑68 (MQ=255) CAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACAATGCGGTgg > 1:20612655‑M1/1‑68 (MQ=255) gttcgtcaacggcgataaaacagatattgtcggtcaacgcgctggcagcggTTACGATGCGGTGGat < 1:3164056‑M2/16‑1 (MQ=255) gttcgcgcaagtcgataaaacagataaagtcgggcaacgcgctggcagcggTTACGATGCGGTGGat < 1:22618362‑M2/16‑1 (MQ=255) cgcgTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGata > 1:15249306/1‑68 (MQ=255) cgcgTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGata > 1:24488814/1‑68 (MQ=255) gcgGTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGa < 1:13225922/65‑1 (MQ=255) cgTTGACCGACAATATCAGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATc > 1:26538278/1‑68 (MQ=255) gtgaaagtcgaaaaaacagatattggcgggcaacgcgcgggcagcggTTACGATGCGGTGGATATCGa < 1:27711357‑M2/21‑1 (MQ=255) tGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGa < 1:4915573/67‑1 (MQ=255) tGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGa < 1:2031356/67‑1 (MQ=255) aaTATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCAc > 1:28953013/1‑67 (MQ=255) aaTATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCAc > 1:13545337/1‑67 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa < 1:5456227/68‑1 (MQ=255) tatCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCa < 1:22049440/68‑1 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCTGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc < 1:24084922/68‑1 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc > 1:23883023/1‑68 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc < 1:8752345/68‑1 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc > 1:23244574/1‑68 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc < 1:3416243/68‑1 (MQ=255) tCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATc < 1:12600021/68‑1 (MQ=255) cTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCa > 1:947628/1‑68 (MQ=255) cTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCa > 1:20094975/1‑68 (MQ=255) cTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCa > 1:19150651/1‑68 (MQ=255) cTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCa > 1:234636/1‑68 (MQ=255) cTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCa > 1:15749724/1‑68 (MQ=255) cTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCa > 1:27080154/1‑68 (MQ=255) tGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAg > 1:4423058/1‑68 (MQ=255) tGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAg > 1:2834506/1‑68 (MQ=255) tGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAg > 1:16002374/1‑68 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:373227/68‑1 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:21157026/68‑1 (MQ=255) gTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGt < 1:17105729/68‑1 (MQ=255) ttttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTa > 1:25147823/1‑68 (MQ=255) ttttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTa > 1:23698061/1‑68 (MQ=255) tttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTaa > 1:9835034/1‑68 (MQ=255) tttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTaa > 1:4055354/1‑68 (MQ=255) tttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTaa > 1:11066609/1‑68 (MQ=255) tttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTaa < 1:5769817/68‑1 (MQ=255) tttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTaa > 1:26234144/1‑68 (MQ=255) tttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTaa > 1:1630023/1‑68 (MQ=255) tttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTaa > 1:674542/1‑68 (MQ=255) tttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTaa > 1:7853522/1‑68 (MQ=255) tttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTaa > 1:4539196/1‑68 (MQ=255) tttATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTa < 1:6994941/67‑1 (MQ=255) aTCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGa > 1:22264739/1‑68 (MQ=255) cGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGaaa > 1:14606270/1‑68 (MQ=255) cGAACGCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGGATCAGTAAAGAAATCATCGTCt < 1:6292410/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGTCACGCATCAGTAAAGAAATCATCGACt < 1:29189490/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:11144590/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:3553325/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt > 1:2955889/1‑68 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:5859746/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:11327595/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:29851411/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:20495656/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:19496990/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:23090754/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:17472494/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:16691724/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:12959540/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:15132689/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACt < 1:28708279/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATAAGTAAAGAAATCATCGACt < 1:7053805/68‑1 (MQ=255) cGAACCCGGCAGCGGTTACGATGCGGTGGAAATCGATCTGGCACGGATCAGTAAAGAAATCATCGACt < 1:25641777/68‑1 (MQ=255) cccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCta < 1:17676804/68‑1 (MQ=255) cccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCta > 1:10908837/1‑68 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:5690/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:11884585/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:892994/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:1081880/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:144583/68‑1 (MQ=255) ccGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCtat < 1:17874303/68‑1 (MQ=255) agcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCa > 1:18106021‑M2/6‑67 (MQ=255) agcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCa < 1:21907909‑M2/62‑1 (MQ=255) gcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCaa > 1:20245364‑M2/5‑67 (MQ=255) gcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCaa > 1:9639095‑M2/5‑67 (MQ=255) tgTTACGATGCGGTGGATATCGATCTGGCACGGATCAGTAAATAATTCATCGACTTCTATATCAAc < 1:11836127‑M2/64‑1 (MQ=255) ggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCaa < 1:14412287‑M2/63‑1 (MQ=255) ggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCaa < 1:9274881‑M2/63‑1 (MQ=255) ggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAc < 1:12185052‑M2/64‑1 (MQ=255) | TGCGCGCCGCTGCCAGCGCGTTGACCGACAATATCTGTTTTATCGACTTTCACGAACCCGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACC > CP009273/3215207‑3215338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |