| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3758457 = | NA (NA) | 100 (0.280) | 3/110 | NT | 15.6% | coding (2915/4134 nt) | rhsA | Rhs family protein, putative polymorphic toxin; putative polysaccharide synthesis/export protein; putative neighboring cell growth inhibitor |
| ? | CP009273 | 3760580 = | 552 (1.530) | intergenic (+41/‑1) | yibA/rhsJ | HEAT‑domain lethality reduction protein; putative immunity protein for putative polymorphic toxin RhsA/Rhs‑family protein | |||||
Only 100 of 862 total aligned reads displayed.
GCTATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCT > CP009273/3760513‑3760647 | gCTATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACg < 1:14545211/68‑1 (MQ=255)gCTATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACg < 1:13832531/68‑1 (MQ=255) aaagatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg < 1:24144826‑M2/1‑1 (MQ=255) aaagatagcgacttacgaccagcggctcttcatattgtgtgcgcgtgtagtgcaccagccggtgctgt < 1:2578837‑M2/2‑2 (MQ=255) tATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGt < 1:15751430/68‑1 (MQ=255) tATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGt < 1:17875622/68‑1 (MQ=255) aagatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:14274356‑M2/66‑66 (MQ=255) agatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:28513267‑M2/65‑65 (MQ=255) agatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:7889916‑M2/65‑65 (MQ=255) agatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:21888857‑M2/65‑65 (MQ=255) agatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:27829281‑M2/65‑65 (MQ=255) agatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:26124200‑M2/65‑65 (MQ=255) agatagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:10224180‑M2/65‑65 (MQ=255) atagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:4871533‑M2/63‑63 (MQ=255) atagcgactttcgaccagcggctcttcatattgtgtccgcgtgtagtgcaccagccggtgctg > 1:26768647‑M2/63‑63 (MQ=255) tAAGCTGTAGCGTGCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGAt < 1:12222940/68‑1 (MQ=255) aGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGAt > 1:6488352/1‑66 (MQ=255) aGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGAt > 1:4385536/1‑66 (MQ=255) aGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGAt > 1:5207316/1‑66 (MQ=255) aGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGAt > 1:24693398/1‑66 (MQ=255) aGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGAt > 1:709299/1‑66 (MQ=255) aGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGAt > 1:11936662/1‑66 (MQ=255) cTGAAGCGTTCATAGCGTGAGTTGCCCATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTc > 1:6128024/1‑68 (MQ=255) aGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGccc > 1:4008709/1‑68 (MQ=255) aGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGAc < 1:1769504/67‑1 (MQ=255) cGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCg > 1:12873095/1‑67 (MQ=255) cGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCg > 1:9180549/1‑67 (MQ=255) cGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCg > 1:29485064/1‑67 (MQ=255) cATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTgg < 1:27418472/68‑1 (MQ=255) tAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGaa > 1:7572469/1‑68 (MQ=255) tAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGaa > 1:3589569/1‑68 (MQ=255) aGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGaaa > 1:25279436/1‑68 (MQ=255) aGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGaaa > 1:1135663/1‑68 (MQ=255) cGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGt > 1:8830521/1‑68 (MQ=255) cGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGt > 1:14968056/1‑68 (MQ=255) gTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGt < 1:1825142/67‑1 (MQ=255) gTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGt < 1:1107411/67‑1 (MQ=255) tGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGa > 1:4240802/1‑68 (MQ=255) aGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGaaa > 1:16936841/1‑68 (MQ=255) gTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGaaa > 1:5819475/1‑67 (MQ=255) gTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGaaa > 1:13644296/1‑67 (MQ=255) ttGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAt > 1:10328893/1‑67 (MQ=255) gCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAAt > 1:28065945/1‑65 (MQ=255) ccTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTg > 1:7269254/1‑68 (MQ=255) tccgcgtgtagtgcaccagccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTg > 1:26585978‑M2/28‑68 (MQ=255) gCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGa < 1:10649268/68‑1 (MQ=255) cacaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGa > 1:19113222/1‑67 (MQ=255) cacaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGa > 1:1472208/1‑67 (MQ=255) cacaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGa > 1:16587433/1‑67 (MQ=255) cacaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGa > 1:15541168/1‑67 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:4732863/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:11636377/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:16193930/1‑68 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc < 1:15931182/68‑1 (MQ=255) acaGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGAcc > 1:25028386/1‑68 (MQ=255) caGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCg > 1:23607961/1‑68 (MQ=255) gTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg > 1:19982416/1‑68 (MQ=255) gTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg > 1:3201414/1‑68 (MQ=255) gTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg > 1:19625285/1‑68 (MQ=255) gTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg > 1:27607166/1‑68 (MQ=255) tGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgt > 1:2285210/1‑68 (MQ=255) gggggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg < 1:29735846/66‑1 (MQ=255) gggggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg < 1:18712767/66‑1 (MQ=255) gggggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCggg < 1:5546813/66‑1 (MQ=255) gggggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCgg < 1:26307816/65‑1 (MQ=255) gggggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtg > 1:22039308/1‑68 (MQ=255) gggggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtg > 1:6277591/1‑68 (MQ=255) gggggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtg > 1:27015373/1‑68 (MQ=255) gggggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtg > 1:9435236/1‑68 (MQ=255) gggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgag > 1:15106381/1‑68 (MQ=255) gggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtga < 1:23459780/67‑1 (MQ=255) ggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgag < 1:1090083/67‑1 (MQ=255) ggATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgag < 1:20762725/67‑1 (MQ=255) gATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagt < 1:18144964/67‑1 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:25517756/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:13219020/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:19418976/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:8399260/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:19802414/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:20401156/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:21622091/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:23161610/1‑68 (MQ=255) aTTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGgtgagtga > 1:22550914/1‑68 (MQ=255) ttCCCGCCGGCCCGGTGCAGATGCTCGCCCGGCTGGAAAGTGAAATCCTGGCTGACCGGGtgagtgag > 1:17378348/1‑68 (MQ=255) gccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa < 1:28324316‑M2/59‑1 (MQ=255) cgccgGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:1008648/1‑68 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:2877722‑M2/9‑67 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:15271918‑M2/9‑67 (MQ=255) ccggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGaaa > 1:23799433‑M2/9‑67 (MQ=255) cggtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgc < 1:8622917‑M2/61‑1 (MQ=255) gtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgcc > 1:12541106‑M2/6‑67 (MQ=255) gtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgcc > 1:17087274‑M2/6‑67 (MQ=255) gtgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgcc > 1:29135944‑M2/6‑67 (MQ=255) tgctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccg > 1:29248638‑M2/5‑67 (MQ=255) gctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgcc < 1:24389097‑M2/65‑1 (MQ=255) gctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgc < 1:8147642‑M2/64‑1 (MQ=255) ctGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgcc > 1:9634468‑M2/3‑67 (MQ=255) aCGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgcc > 1:7361926/1‑67 (MQ=33) aCGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAgccgcc > 1:21099467/1‑67 (MQ=33) tGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCcgccgc < 1:16025807‑M2/67‑1 (MQ=255) | GCTATTGATAAGCTGAAGCGTTCATAGCGTGAGTTGCCTATGCACAGTGGGGGATTCCCGCCGGCACGGTGCAGATGCTCGACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCT > CP009273/3760513‑3760647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |