| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4161825 = | NA (NA) | 12 (0.040) | 4/96 | NT | 100% | intergenic (+141/‑160) | rrfB/murB | 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding |
| ? | CP009273 | 4161830 = | 0 (0.000) | intergenic (+146/‑155) | rrfB/murB | 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding | |||||
Only 100 of 141 total aligned reads displayed.
AGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTT > CP009273/4161763‑4161897 | aaaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctg < 1:6561514‑M2/1‑1 (MQ=255) aaaaggccatccgtccggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:28914135‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:14175600‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:18644166‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:18785089‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:19339776‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:19537733‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:20268322‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:2186479‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:16798435‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:25435146‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:1534827‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:264194‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:26526145‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:14431864‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:26812633‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:14094653‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:28555534‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:28944563‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:12511580‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:29443722‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:7996377‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:11155990‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:835851‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:8479483‑M2/2‑1 (MQ=255) aaaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:10836414‑M2/2‑1 (MQ=255) aaaaggccatccggcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:13806006‑M2/2‑1 (MQ=255) aaaagcccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc < 1:9852402‑M2/2‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:28747256‑M2/3‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:4157775‑M2/3‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGcc < 1:218900‑M2/3‑1 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGc > 1:10381178‑M2/66‑67 (MQ=255) aaaggccatccgtcaggatggccttctgcttaatttgatgcctggcagattatggcgggcgtcctGcc < 1:23987042‑M2/3‑1 (MQ=255) catccgtcaggatggccttcagcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCAt < 1:18743484‑M2/9‑1 (MQ=255) tccgtccggatggccttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATaa < 1:25815199‑M2/11‑1 (MQ=255) ttctgcttaatttgatgcctggccgtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:1797639‑M2/26‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:9005573‑M2/26‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:21325490‑M2/26‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:14597302‑M2/26‑1 (MQ=255) ttctgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:23068462‑M2/26‑1 (MQ=255) ttctgcttaatttgatgcctggcagtgtctggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:3298772‑M2/26‑1 (MQ=255) tctgcttaatttgctgcctggctgtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCaa < 1:29721266‑M2/26‑1 (MQ=255) tgcttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCAAAtt < 1:5749654‑M2/29‑1 (MQ=255) ttaatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCAAATTaa < 1:13676720‑M2/31‑1 (MQ=255) taatttgatgcctggcagtttatggcgggcgtcctGCCCGCCATAAACTGCCAGGCATCAAATTAAGc < 1:25730621‑M2/33‑1 (MQ=255) gtcctGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTg < 1:1439099‑M2/63‑1 (MQ=255) aCGCCCGCCATAAACTGCCTGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:2087641/1‑68 (MQ=18) aCGCCCGCCATAAACTGCCAGGCATCACATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:26375407/1‑68 (MQ=18) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGCCGGATGGCCTTTTTGCGt > 1:8093586/1‑68 (MQ=18) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGCTGGCCTTTTTGCGt > 1:4899246/1‑68 (MQ=18) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCg < 1:273881/67‑1 (MQ=31) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCg < 1:1726135/67‑1 (MQ=31) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCg < 1:11601293/67‑1 (MQ=31) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:28426505/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:11004814/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:13218602/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:4818663/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:10845589/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:7059539/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:29669777/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:4896554/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:7238779/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:16733725/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:5940020/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:24442418/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:22603833/1‑68 (MQ=33) aCGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGt > 1:23898463/1‑68 (MQ=33) cgcccgccATAAACTGCCAGGCATCAAATTACGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:6322721/1‑67 (MQ=16) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGTTGGCCTTTTTGCGtg > 1:27527490/1‑67 (MQ=16) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:27407745/1‑68 (MQ=35) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg < 1:28235/68‑2 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:11826234/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:29263373/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:20133355/1‑67 (MQ=18) cgcccgccATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtg > 1:26286195/1‑67 (MQ=18) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:25133774‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:18493945‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:18384676‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:18162950‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:20463859‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:21764025‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:7610548‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:7416419‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:23374180‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:24851392‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:6009118‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:11938584‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:25406893‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:5367418‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:5214922‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:15224549‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:4822810‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:27763388‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:27881579‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:28595487‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:3252429‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:13031350‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGcgtgg < 1:29614283‑M2/68‑3 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCgtg > 1:22808000‑M2/1‑66 (MQ=255) GCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGtt > 1:2254198‑M2/1‑67 (MQ=255) | AGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTT > CP009273/4161763‑4161897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |