| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4061067 = | 460 (0.970) | 36 (0.090) | 12/94 | NT | 9.9% | coding (1570/2037 nt) | yihQ | alpha‑glucosidase |
| ? | CP009273 | 4061094 = | 266 (0.670) | coding (1543/2037 nt) | yihQ | alpha‑glucosidase | |||||
Only 100 of 250 total aligned reads displayed.
GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4061142‑4061067‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgcgctTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCCAG > CP009273/4061094‑4061160 GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:23384015/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:24279406/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:33765797/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:17821427/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:16383715/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:27635340/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:1558434/68‑1GGCCGGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:6433844/68‑1 GCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:39061294/1‑67 CCTGCACCACAGCTACATTGGCGGGTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTG < 1:29427870/67‑1 CCTGCACCACAGCGACATTGGCGGTTACACCCCCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:4193875/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTG < 1:20831093/67‑1 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:29811599/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:28858909/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:30472421/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:3143685/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:3162318/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:27133994/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:31961802/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:26405406/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:4881181/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:34178511/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:34672276/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:23224032/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:22568592/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:22487143/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:7116160/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:10216846/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:9016317/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:13359507/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:10128158/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTAGAGATGAAGCGCAGCAAAGAGCAGCTGC > 1:6561455/1‑68 CCTGCACCACAGCGACAATGGCGGTTACACCACACTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:19042682/1‑66 CTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCT < 1:602734/68‑1 CTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCT < 1:20760156/68‑1 GCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC < 1:38464239/68‑1 GCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC < 1:1270962/68‑1 GCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC < 1:36891426/68‑1 GCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC < 1:17990657/68‑1 CACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:28533029/1‑67 CACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:17596071/1‑67 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGC < 1:11173624/68‑1 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGC < 1:6083415/68‑1 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCG < 1:21896791/67‑1 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:12335466/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:37727804/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:3102413/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:13974521/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:16767161/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:19555500/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:23502069/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:25576681/1‑66 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCT < 1:20455356/68‑1 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:10708462/1‑65 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:14545644/1‑65 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:15294799/1‑65 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:25284691/1‑65 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:23920379/1‑65 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:8707649/1‑65 GACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:26157308/65‑1 GACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:19929274/65‑1 GACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:11881520/65‑1 GACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:38016181/65‑1 GACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:36580278/65‑1 GACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:514647/65‑1 GACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:19203091/65‑1 GACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:9160701/65‑1 GACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:14970319/65‑1 CATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAA < 1:29369148/68‑1 CATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAA < 1:27543426/68‑1 CATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCA < 1:19589925/67‑1 CGGTTACACCACCCTGTTTGAGATGCAGCGCAGCAAAGAGCAGCTGCTGCGCTTCATCTCAAACAGG < 1:21599661/67‑1 CGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGG < 1:33455230/67‑1 CGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGG < 1:20174750/67‑1 CGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGG < 1:29140633/67‑1 gTACACCACCCTGTTTGAGATGCAGCCCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTG < 1:37799322/66‑1 gTACACCACCCTGTTTGAGATGAACCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTG < 1:9641248/66‑1 TTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTG < 1:34275730/67‑1 TACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTGG < 1:1260467/67‑1 CCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCG < 1:13414779/68‑1 GAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGT < 1:38680027/68‑1 GAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAACGTCGCTGT < 1:38288204/68‑1 GCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCA > 1:17382211/1‑68 GCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCCGTCA > 1:2306767/1‑68 GCTGCGCTTCATCTCAAACACGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCA > 1:32943556/1‑68 CTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCAT > 1:2110521/1‑68 CTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCAT > 1:5107250/1‑68 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT < 1:31196461/68‑1 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT > 1:28021645/1‑68 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT < 1:3572458/68‑1 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCAT < 1:15671336/67‑1 GCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT > 1:32651499/1‑67 GCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT > 1:7582772/1‑67 GCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCCCTGTGGTGCAGGCCATGTCCGGTCATT > 1:36038741/1‑67 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCC > 1:26655045/1‑68 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCC > 1:8101894/1‑68 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCC > 1:4470981/1‑68 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCC > 1:9473887/1‑68 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGC < 1:34919945/67‑1 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGGCATTGC < 1:32096345/67‑1 GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4061142‑4061067‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgcgctTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCCAG > CP009273/4061094‑4061160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |