| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 66560 = | 321 (0.680) | 1578 (5.510) +CGTTTTTTTGGATGGAGGAATT |
48/68 | NT | 86.6% | intergenic (‑28/‑314) | araD/araC | pseudogene, truncated/ara regulon transcriptional activator; autorepressor |
| ? | CP009273 | = 3509273 | 486 (1.030) | intergenic (‑1/+106) | dam/damX | DNA adenine methyltransferase/cell division protein that binds to the septal ring | |||||
Only 100 of 3694 total aligned reads displayed.
TTATCCATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/66626‑66560‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAA < CP009273/3509273‑3509208 |||||||||||||||||||||| CCATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTT > 1:23338547/1‑68 CCATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTT > 1:12877660/1‑68 CATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTT < 1:2702548/68‑1 CATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTT < 1:35739827/68‑1 CATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTT < 1:38969774/68‑1 AGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTG > 1:10941189/1‑68 TTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGG < 1:21454603/66‑1 GCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGA > 1:5238992/1‑68 CGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAG > 1:22184753/1‑68 CGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAG > 1:20509324/1‑68 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGG > 1:36128643/1‑68 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGG > 1:27763032/1‑68 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGG > 1:24896980/1‑68 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGG > 1:29178070/1‑68 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGG > 1:121678/1‑68 GGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGA < 1:15323047/66‑1 ATCCAACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGA < 1:26091408/67‑1 CCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAAT > 1:13545324/1‑67 CTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTC > 1:3214179/1‑68 CCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATG > 1:6294303/1‑68 CCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATG > 1:8313731/1‑68 CCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATG > 1:18023608/1‑68 CTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGA > 1:19742832/1‑68 TGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAA > 1:15021552/1‑68 GACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAG > 1:30208763/1‑68 CGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAA > 1:2392501/1‑68 CGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAA > 1:3755624/1‑68 TCGCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTAATGAAGAAAAATCGC > 1:4100540/1‑66 GCAACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTT > 1:6987305/1‑68 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:14307325/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:29872553/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:18402852/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:38543247/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:4881640/67‑1 AACTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:4487863/67‑1 CTCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTT < 1:24601661/65‑1 TCTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTG > 1:138939/1‑68 CTCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGA < 1:33946746/68‑1 TCTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAA < 1:32826824/68‑1 CTACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAG > 1:5917532/1‑68 CTACTGTTACTCCATACCCGTTTTTTTGGTTTGAGGAATTCATGAAGAAAAATGGCGCTTTTTTGAAG < 1:22928868/68‑1 ACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTG > 1:26450449/1‑68 ACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTG > 1:9327687/1‑68 ACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTG > 1:23672100/1‑68 ACTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTG > 1:16134302/1‑68 CTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG < 1:28833243/68‑1 CTGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:31142605/1‑68 TGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGG < 1:9671100/68‑1 TGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGG < 1:16875190/68‑1 TGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:26773197/1‑67 TGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:32503603/1‑67 TGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:2851425/1‑67 TGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:30584148/1‑67 TGTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:10701501/1‑67 TGTTTCTCCAAACACGTTTATTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGG > 1:35389666/1‑67 GTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGC > 1:29483767/1‑68 GTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGC > 1:6628336/1‑68 GTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGC < 1:31806948/68‑1 GTTTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGC < 1:33685973/68‑1 TTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAG > 1:8985412/1‑68 TTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAG > 1:30864052/1‑68 TTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAG > 1:11667544/1‑68 TTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAG > 1:5576442/1‑68 TTCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAG > 1:28080107/1‑68 TCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGG < 1:7653907/68‑1 TCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGG < 1:37981897/68‑1 TCTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAACAAAAATCGCGCTTTTTTGAAGTGGGCAGG < 1:16478450/68‑1 CTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGG > 1:15825415/1‑68 CTCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGG < 1:734182/68‑1 TCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGG > 1:10007324/1‑68 TCCATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGG < 1:36831007/68‑1 TCCATACCCGTTTTTTTGGATGGAGGAATCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGG > 1:27392974/1‑68 CATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGC > 1:25670510/1‑68 CATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGC > 1:25313257/1‑68 ATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCA < 1:11295371/68‑1 ATACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCA < 1:17689431/68‑1 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG < 1:7963612/68‑1 ACCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG < 1:33345302/68‑1 CCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGT > 1:13202395/1‑68 CCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGT > 1:21900142/1‑68 CCCGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGT > 1:34283982/1‑68 CGTTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTAT < 1:17326356/68‑1 gaTTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATC < 1:2251953/66‑1 TTTTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCC < 1:2108245/67‑1 TTTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCT < 1:35019942/68‑1 TTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTG < 1:20115489/68‑1 TTTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTG < 1:1905972/68‑1 TTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGC < 1:12561688/68‑1 TTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGC < 1:38251880/68‑1 TTGGATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGC < 1:8663315/68‑1 ATGGAGGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGA > 1:19307379/1‑68 TGGAGGAATTCATGAAGAAAAATCGCTCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGA < 1:20785063/67‑1 GGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGAT < 1:14692028/67‑1 GGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGAT < 1:31453623/67‑1 GGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGAT < 1:37238974/67‑1 GGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGAT < 1:24202908/67‑1 GGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGAT < 1:18703979/67‑1 GGAATTCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGAT < 1:1034249/67‑1 TCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAA > 1:34762021/1‑67 TCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAA > 1:36493540/1‑67 |||||||||||||||||||||| TTATCCATAAGATTAGCGGATCCTACCTGACGCTTTTTATCGCAACTCTCTACTGTTTCTCCATACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/66626‑66560‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAA < CP009273/3509273‑3509208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |