| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 410282 | 364 (0.770) | 50 (0.120) | 13/98 | NT | 12.9% | coding (928/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent |
| ? | CP009273 | = 410288 | 356 (0.860) | coding (922/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent | |||||
Only 100 of 102 total aligned reads displayed.
GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/410211‑410282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGCA < CP009273/410288‑410222 ggGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:38953925/65‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCT < 1:37009157/68‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCT < 1:27107111/68‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:12649711/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:19736203/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:36780477/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:17185352/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:3657173/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:35280111/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:23447986/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:23924465/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:24390751/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:249941/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:12037761/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:7790048/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:8086308/67‑1 TGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTG > 1:6177637/1‑68 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:33847907/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:12371988/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTG > 1:14707872/1‑67 TGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGC < 1:38779944/67‑1 CGCCATTGTGCTCTGTAAGCGCGTATTTACTTCTTCAATCTGCTGGCGCTTATTGGCCAGCAGATTGA > 1:31088189/1‑68 CGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCTTTTTCGCCAGCAGATTGA > 1:27307370/1‑68 CGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATTTTCGCCAGCAGAGTGA > 1:28042112/1‑68 CGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGGTTGA > 1:27938271/1‑68 ATTGTGCTCTGTAAGCGAGTATTTACTTCTTAAATCTGCTGGGGCATTTTCGCCAGCAGATTGCAGAA > 1:19883632/1‑68 TGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATTTTCGGCAGCAGATTGAAGAAGT > 1:34576533/1‑68 TGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGT > 1:34933864/1‑68 GTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTA > 1:1254615/1‑68 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCTTATTCTCCAGCAGAGTGAAGAAGTAAA > 1:27356678/1‑68 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGGAGAAGTAAA > 1:28562292/1‑68 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAA > 1:28095746/1‑68 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGGCAGCAGAGTGAAGAAGTAAAT > 1:30788713/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:18395750/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:10359420/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:9413984/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:10943874/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:11345653/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:11824917/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:7049700/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:12550648/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:12816568/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:18865483/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:37332407/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTAGCCAGCAGATTGAAGAAGTAAAT > 1:6284573/1‑67 GTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCCGCAGATTGCAGCAGTAAATACgc > 1:14306134/1‑66 GTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTC > 1:4781880/1‑68 GTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTC > 1:34052628/1‑68 GTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTC > 1:33977660/1‑68 CGAGTATTTACTTCTTCAATCTGCTGGCGGATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:8280976/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTGGCGAGGAGATTGAAGAGGTAAATACTCGCgt > 1:33286157/1‑65 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGGCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:3993455/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:768901/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:8073266/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:36080681/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:20399238/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:469860/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:36590849/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:31334602/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:14513801/1‑67 AGTATTTACTTCTTCAATCTGCTGGCGCATATTCGGCAGCAGATTGAAGAAGTAAATACTCGCGTACA > 1:23673755/1‑68 AGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACA > 1:10787677/1‑68 AGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACA > 1:2318841/1‑68 AGTATTTAATTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACA > 1:10903788/1‑68 TTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATTCTCGCTTACAGCGC > 1:31577551/1‑67 TTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGC > 1:17196856/1‑67 CTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACTGAGCACAt > 1:14037689/1‑67 CTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAA > 1:20417412/1‑68 TTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTATATACTCGCTTACAGAGCACAAT > 1:10946767/1‑68 TCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATG > 1:32120914/1‑68 TCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATG > 1:12405889/1‑68 AATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCT > 1:23891879/1‑68 TCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTC > 1:27658583/1‑68 CTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTATATACTCGCTTTCAGCGCACTATGGCGCTTC > 1:11615907/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGCGCACAATGGCGCTTCGC > 1:1104927/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:2844465/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC < 1:7349542/67‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC < 1:15966620/67‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:15980696/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC < 1:30281458/67‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:20198911/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:24541471/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:34625199/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC < 1:22991322/67‑1 GGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGA < 1:38913841/68‑1 GGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGA > 1:1235661/1‑68 GGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGA > 1:22275726/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:12880213/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:845108/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:26991819/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:7300632/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:1291599/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:22091292/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:14644475/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:4485939/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:18144775/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:16224473/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:37446137/1‑68 GCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGCA < 1:16675423/68‑1 GCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGACCACAATGGCGCTGCGCGCGAGC < 1:11885180/67‑1 GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/410211‑410282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGCA < CP009273/410288‑410222 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |