| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1101408 = | 224 (0.470) | 32 (0.080) | 8/94 | NT | 14.0% | coding (133/534 nt) | ymdB | O‑acetyl‑ADP‑ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit |
| ? | CP009273 | 1101450 = | 206 (0.520) | coding (175/534 nt) | ymdB | O‑acetyl‑ADP‑ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit | |||||
Only 100 of 180 total aligned reads displayed.
AAGCGTAATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1101482‑1101408‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGCAC > CP009273/1101450‑1101515 AAGCGTAATATGGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCA < 1:6862945/68‑1AAGCGTAATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCA < 1:1113824/68‑1AAGCGTAATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCA < 1:24259869/68‑1AAGCGTAATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCA < 1:3471598/68‑1AAGCGTAATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCA < 1:21856144/68‑1AAGCGTAATAACAGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCA < 1:8534038/68‑1 AGCGTAATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCA < 1:27023568/67‑1 GTAATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGAGTTTTAAACAAGCATCCAGC < 1:29209470/66‑1 GTAATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGC < 1:38825452/66‑1 AATAACGGCATGCCCCGTAGGTCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGG < 1:16171698/67‑1 AATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGG < 1:10097430/68‑1 AATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGG < 1:19877670/68‑1 AATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGG < 1:31765869/68‑1 AATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGG < 1:12716637/68‑1 AATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGG < 1:30670802/68‑1 AATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGG < 1:6054148/67‑1 AATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGG > 1:16376802/1‑67 AATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGG < 1:22661814/67‑1 AATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGG < 1:37904012/67‑1 AATAACGGCATGCCCCGCAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGG < 1:19332808/67‑1 ATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGC < 1:4472437/68‑1 ATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGC < 1:22261506/68‑1 ATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGC < 1:13461114/68‑1 TAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGCG < 1:24447686/68‑1 caaGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGCGATTGC < 1:30690223/64‑1 CATGCCCCGTATGGCAATCGCCCTGCTGTTGCCTTACTTTTAAACAAGCATCCAGCAGGGCGATTGC < 1:32746750/67‑1 CATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGCGATTGC < 1:20625779/67‑1 CATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGCGATTGC < 1:23892224/67‑1 CATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGCGATTGC < 1:14231004/67‑1 CATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGCGATTGC < 1:37088973/67‑1 CATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGCGATTGC < 1:2273982/67‑1 CATGCCCCGAAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAACCAAGCATCCAGCAGGGCGATTGC < 1:18367458/67‑1 ATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACACGCATCCAGCAGGGCGATTGCCC < 1:5068526/68‑1 ATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGCGATTGCCC < 1:6641580/68‑1 ATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGCGATTGCC < 1:34174533/67‑1 ATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGCGATTGCC < 1:35574677/67‑1 GTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCACCCAGCAGGGCGATTGCCCTACGGGG < 1:29049708/68‑1 AATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGCGATTGCCCTACGGGGCATGCC < 1:39122479/67‑1 AATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGCGATTGCCCTACGGGGCATGCC < 1:27204606/67‑1 AATCGCCCTGCTGTTGCCTGACTTTAAAACAAGCATCCAGCAGGGCGATTGCCCTACGGGGCATGCC < 1:36175015/67‑1 AATCGCCCTGCTGTGGCCTGACTTTTAAACAAGCATCCAGCAGGGCGATTGCCCTACGGGGCATGCC < 1:16529212/67‑1 agCGCCCTGCTGGTGCCTGACTTTAAACCAACCACCCAGCAGGGCGATTGCCCTACGGGGCATGCCGT < 1:36253471/66‑1 ATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGCGATTGCCCTACGGGGCATGCCGT < 1:35581700/68‑1 ATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGCGATTGCCCTACGGGGCATGCCGT < 1:26120523/68‑1 ATCGCCCTGCTGTGGCCTGACTTTTAACCCAGCATCCAGCAGGGCGATTGCCCTACGGGGCATGCCGT < 1:36365680/68‑1 ATCGCCCTGCGGTTGCCTGACTTTAAAACAACCATCCAGCAGGGCGATTGCCCTACGGGGCATGCCGT < 1:5800638/68‑1 CTGCCTTTAAAACACGCATCCCGCCGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGG < 1:35664759/67‑1 aaaAGCAGGGCGATTGCCCTTCGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCGGCTAAAGC < 1:4026979/64‑1 AGCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAACGCCGTA > 1:326125/1‑68 GCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG > 1:35769515/1‑68 GCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG > 1:32013820/1‑68 GCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG > 1:1013837/1‑68 GCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG > 1:5227400/1‑68 GCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG > 1:30460172/1‑68 GCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG > 1:25445004/1‑68 GCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG > 1:2365802/1‑68 GCAGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG > 1:9051592/1‑68 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGT < 1:29610502/67‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGT < 1:9310317/67‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGT < 1:24368497/67‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGT > 1:11802534/1‑67 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGT > 1:23503126/1‑67 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGT > 1:22000259/1‑67 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGT < 1:15102461/67‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGT > 1:30133747/1‑67 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGT < 1:3643922/67‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGT < 1:14545522/67‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG < 1:16977179/66‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG < 1:20314316/66‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG < 1:36792657/66‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG < 1:12837762/66‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG < 1:1255038/66‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG < 1:8492537/66‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG < 1:35395402/66‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG < 1:8296737/66‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG < 1:21377517/66‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG < 1:21690327/66‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG < 1:33153852/66‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG < 1:32167075/66‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAG < 1:6466736/66‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGT < 1:14356615/64‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGT < 1:34477667/64‑1 AGGGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGAGCTTCCCGCTAAAGCCGTAG < 1:17618398/66‑1 AGGGCGATTGCCCTACGGGGCATGCCGGTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGT < 1:29124392/67‑1 AGGGCGACTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGT < 1:7164911/67‑1 GGCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGC > 1:28454377/1‑67 GCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGCAC > 1:33789418/1‑68 GCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGCAC > 1:328312/1‑68 GCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGCAC > 1:8015231/1‑68 GCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGCAC > 1:20631210/1‑68 GCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGCAC > 1:10777046/1‑68 GCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGCA > 1:23422540/1‑67 GCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGCA < 1:8115835/67‑1 GCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGC < 1:28244177/66‑1 GCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGC < 1:24672688/66‑1 GCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGC < 1:24495653/66‑1 GCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGC < 1:18502823/66‑1 GCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGC < 1:16274830/66‑1 GCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGC < 1:13192726/66‑1 GCGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGC < 1:9728788/66‑1 AAGCGTAATAACGGCATGCCCCGTAGGGCAATCGCCCTGCTGTTGCCTGACTTTTAAACAAGCATCCAGCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1101482‑1101408‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagggcGATTGCCCTACGGGGCATGCCGTTATTACGCTTGCAGGCGATCTTCCCGCTAAAGCCGTAGTGCAC > CP009273/1101450‑1101515 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |