| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1238033 = | 606 (1.280) | 25 (0.080) | 14/76 | NT | 7.1% | coding (504/915 nt) | ldcA | murein tetrapeptide carboxypeptidase; LD‑carboxypeptidase A |
| ? | CP009273 | 1238051 = | 241 (0.750) | coding (486/915 nt) | ldcA | murein tetrapeptide carboxypeptidase; LD‑carboxypeptidase A | |||||
Only 100 of 156 total aligned reads displayed.
CTTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1238117‑1238033‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccgacatgtcgggccTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAAG > CP009273/1238051‑1238117 CTTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCCCCATTGAATGGCAAGGGGAAG < 1:14652741/68‑1CTTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAG < 1:37681139/68‑1 TTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGG < 1:30188280/68‑1 TTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGG < 1:31636567/68‑1 TTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGG < 1:13769949/68‑1 TTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGC < 1:46276/68‑1 TTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGC < 1:26373762/68‑1 TTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGC < 1:17281911/68‑1 TACCGAGCACCATTTCTGGCTGGCGTTACGCGATGAAACCTTCACCATTGAATGGCAAGGGGAAGGC > 1:11147866/1‑67 TACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCC < 1:6110161/68‑1 TACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCC < 1:3577580/68‑1 TACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCC < 1:36410422/68‑1 acaGAGCACTATTTCTGGCTGGAGTTACGCAAAGAAACCTTCACCATTGAATGCCAAGGGGAAGGCCC > 1:28922636/4‑68 ACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCC > 1:35203065/1‑68 ACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCC > 1:7485711/1‑68 ACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCC > 1:15653853/1‑68 CCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG < 1:20695163/68‑1 CCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:32027089/1‑68 CCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG < 1:7345024/68‑1 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:10261256/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:20668101/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:26689604/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:28632696/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:30914602/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:3286268/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:34708654/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:8407780/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:14468091/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGACCGA > 1:4293545/1‑68 CACCATTTCTGGCTGGCG‑TACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGT < 1:11900399/68‑1 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATG > 1:20501365/1‑67 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATG < 1:1380310/67‑1 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATG < 1:10806980/67‑1 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATG < 1:25345039/67‑1 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACAT < 1:18210222/66‑1 ATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGG > 1:22992174/1‑68 TTTCTGGCTGGCTTTACGCAATGAAACCTTCACCATTCAATGGCAAGGGGAAGGCCCGACATGTCGGG < 1:33649352/68‑1 TTTCTGGCTGGCGTTACGCAATGAACCCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGG < 1:11825879/68‑1 TTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGG > 1:24677686/1‑67 TTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGG > 1:24605988/1‑67 TCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACCTGTGGGG > 1:10734899/1‑66 TCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCC > 1:7255446/1‑68 CTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCC < 1:543536/67‑1 TGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGTGGAAGGCCCGACATGTCGGGCCTTCCCC < 1:31541199/68‑1 TGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCC < 1:28218381/68‑1 TGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCC < 1:24968209/67‑1 TACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCC < 1:12443132/67‑1 ACGCAATGAAACCTTCCCCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCAT < 1:31902641/68‑1 ACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCAT < 1:12759027/68‑1 AATGAAACGTTCACCTTTGAATGGCAAGGGGAAGGCCCGACTTGTCGGGCCTTCCCCTTGCCATTCA < 1:24018339/67‑1 AATGAAACCTTCACCATTGAATGGCAAGGGGACGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCA < 1:16752071/67‑1 AATGAAACCTTCACCATTGAATGCCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCA < 1:29913191/67‑1 AACCTTCACCCTTGACCGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGT < 1:31931998/67‑1 AACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGT < 1:31061038/67‑1 ACCTTCACCATTGAATGGCAAGGGGAGGGCCCGACATGTCGGGCCTTCCCCTTGCCATTGAATGGTGA > 1:35845956/1‑68 TCACCATTGAATGGCCAGGGGAAGGCCCGACATGGCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGT < 1:34732126/68‑1 CCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTC > 1:36742618/1‑68 TGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATT > 1:6096844/1‑67 AATGGCACGGGCACGGCCCGCCATGCCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGC < 1:5274775/67‑1 ATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGT > 1:27026956/1‑68 GGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTA > 1:23074315/1‑67 GGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTA > 1:34706976/1‑67 GGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAG > 1:27616489/1‑67 GGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGA < 1:20475059/68‑1 GGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGA < 1:26066322/68‑1 GCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAA > 1:37764244/1‑68 GCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAA > 1:9207402/1‑68 CCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAA > 1:6242909/1‑68 CCCGACATGTCGGGCCTCCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAA < 1:13212969/68‑1 ACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCCGCCAGAAATGGT > 1:33774984/1‑68 ACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACG > 1:32187148/1‑53 CATGTCGGGCCTTCCCCTTGGCATTCATTGGTGAAGGTATCATTGCGTAACGCCAGCCAGAAATGGT < 1:27615348/67‑1 CATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT < 1:32305293/67‑1 CATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT < 1:16473595/67‑1 CATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT < 1:34328208/67‑1 CATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGCTTTCATTGCGTAACGCCAGCCAGAAATGGT < 1:8628313/67‑1 ATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGC < 1:32689991/68‑1 ATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGC < 1:17200867/68‑1 ATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT > 1:9444151/1‑66 ATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT > 1:36921401/1‑66 TGTCGGGCCTTCCCCTTGCCATTCATTGGTGAAGGTTTCATTGCGGAACGCCAGCCAGAAATGGTGC > 1:6793453/1‑67 TGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCT < 1:15365532/68‑1 TCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG > 1:6098179/1‑68 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:9726789/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:38203525/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:29488512/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:18358883/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:17959235/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:15247391/67‑1 GGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGT < 1:38192576/68‑1 GGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGT < 1:1113833/68‑1 GGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGG < 1:21219622/67‑1 GCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAA > 1:34413818/1‑68 GCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAA > 1:21342810/1‑68 CCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAA > 1:6722935/1‑68 CCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAA > 1:28111467/1‑68 CCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAA > 1:25451818/1‑68 CCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAA > 1:10396291/1‑68 CTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAAG > 1:4389558/1‑68 CTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAA < 1:35232591/67‑1 CTTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1238117‑1238033‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccgacatgtcgggccTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAAG > CP009273/1238051‑1238117 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |